MYBPC3 variants in HCM cohorts


The table below lists the 1176 rare (MAF<0.0001 in ExAC) protein-altering MYBPC3 variants identified in a cohort of 6179 HCM patients (3267 patients from OMGL, 2912 patients from LMM). When this rare variant frequency of 0.19032 is compared with a background population rate of 0.01970, there is a statistically significant case excess of 0.17062 (p<0.0001), which suggests that approximately 1,058 of these variants may be pathogenic.


Variant Type:      All protein-altering variants     -     Truncating variants     -     Non-Truncating variants
Source:      Combined (OMGL + LMM)     -     OMGL     -     LMM



No. Variant (CDS) Variant (Protein) Variant Type Cases (6179)OMGL classLMM class ExAC frequency
1. c.1504C>T p.R502Wmissense 104Pathogenic (59)Pathogenic (45)0.000024
2. c.772G>A p.E258Kmissense 68Pathogenic (47)Pathogenic (21)0.000039
3. c.2373_2374insG p.Trp792ValfsTer41frameshift 66Pathogenic (40)Pathogenic (26)0.000037
4. c.1624G>C p.E542Qmissense 41Pathogenic (24)Likely Pathogenic (17)0.000024
5. c.1928-2A>G essential splice site 30Pathogenic (10)Pathogenic (20)0.000000
6. c.655G>C p.V219Lmissense 26Likely Pathogenic (18)Likely Pathogenic (8)0.000000
7. c.2429G>A p.R810Hmissense 19VUS (11)VUS favour pathogenic (8)0.000033
8. c.2096delC frameshift 19Pathogenic (15)Pathogenic (4)0.000000
9. c.2827C>T p.R943Xnonsense 18Pathogenic (11)Pathogenic (7)0.000017
10. c.3226_3227insT frameshift 18Pathogenic (12)Pathogenic (6)0.000000
11. c.2864_2865delCT frameshift 14Pathogenic (8)Pathogenic (6)0.000000
12. c.1484G>A p.R495Qmissense 14Likely Pathogenic (4)VUS favour pathogenic (10)0.000008
13. c.1483C>G p.R495Gmissense 14Likely Pathogenic (10)Likely Pathogenic (4)0.000000
14. c.3697C>T p.Q1233Xnonsense 13Likely Pathogenic (4)Pathogenic (9)0.000008
15. c.3330+2T>G essential splice site 11Pathogenic (11)0.000000
16. c.2308G>A p.D770Nmissense 11Likely Pathogenic (5)Likely Pathogenic (6)0.000008
17. c.442G>A p.G148Rmissense 11Likely Pathogenic (4)VUS favour pathogenic (7)0.000042
18. c.927-2A>G essential splice site 10Pathogenic (8)Pathogenic (2)0.000000
19. c.2604_2605delinsA p.S871fsframeshift 10Pathogenic (8)Pathogenic (2)0.000000
20. c.3613C>T p.R1205Wmissense 10Likely Pathogenic (10)0.000016
21. c.3190+2T>G essential splice site 9Pathogenic (7)Pathogenic (2)0.000016
22. c.3771C>A p.N1257Kmissense 9Likely Pathogenic (9)0.000000
23. c.2309-2A>G essential splice site 9Pathogenic (9)0.000000
24. c.1505G>A p.R502Qmissense 8Pathogenic (2)Pathogenic (6)0.000000
25. c.2490_2491insT p.His831SerfsTer2frameshift 8Pathogenic (7)Pathogenic (1)0.000024
26. c.3627+1G>A essential splice site 8Pathogenic (6)Pathogenic (2)0.000000
27. c.2670G>A p.W890Xnonsense 7Pathogenic (7)0.000000
28. c.2905+1G>A essential splice site 7Pathogenic (3)Pathogenic (4)0.000000
29. c.710A>C p.Y237Smissense 6Likely Pathogenic (3)Likely Pathogenic (3)0.000000
30. c.3065G>C p.R1022Pmissense 6Likely Pathogenic (5)VUS favour pathogenic (1)0.000025
31. c.2573G>A p.S858Nmissense 6Likely Pathogenic (2)VUS favour pathogenic (4)0.000000
32. c.2459G>A p.R820Qmissense 6VUS (5)Likely Pathogenic (1)0.000016
33. c.1828G>A p.D610Nmissense 5VUS (2)VUS (3)0.000000
34. c.2905C>T p.Q969Xnonsense 5Pathogenic (2)Pathogenic (3)0.000000
35. c.2267delC frameshift 5Pathogenic (5)0.000000
36. c.2556_2557delinsTCT p.Gly853fsframeshift 5Pathogenic (4)Pathogenic (1)0.000000
37. c.2610delC frameshift 5Pathogenic (5)0.000000
38. c.913_914delTT frameshift 5Pathogenic (5)0.000000
39. c.821+2T>C essential splice site 5Pathogenic (4)Pathogenic (1)0.000000
40. c.821+1G>A essential splice site 5Pathogenic (1)Pathogenic (4)0.000043
41. c.2374T>C p.W792Rmissense 5Likely Pathogenic (5)0.000000
42. c.3064C>T p.R1022Cmissense 5VUS (1)VUS favour pathogenic (4)0.000008
43. c.3277G>T p.G1093Cmissense 4VUS (3)VUS (1)0.000020
44. c.3286G>T p.E1096Xnonsense 4Pathogenic (3)Pathogenic (1)0.000000
45. c.1483C>T p.R495Wmissense 4Likely Pathogenic (2)VUS favour pathogenic (2)0.000000
46. c.2210C>T p.T737Mmissense 4VUS (3)VUS (1)0.000050
47. c.3408C>A p.Y1136Xnonsense 4Pathogenic (3)Pathogenic (1)0.000000
48. c.3763G>A p.A1255Tmissense 4VUS (3)VUS favour pathogenic (1)0.000075
49. c.3163A>T p.K1055Xnonsense 4Pathogenic (4)0.000000
50. c.2182G>T p.E728Xnonsense 4Pathogenic (4)0.000000
51. c.3181C>T p.Q1061Xnonsense 4Pathogenic (3)Pathogenic (1)0.000016
52. c.484C>T p.Q162Xnonsense 4Pathogenic (4)0.000000
53. c.3798C>G p.C1266Wmissense 4VUS (4)0.000000
54. c.26-2A>G essential splice site 4Pathogenic (4)0.000051
55. c.2873C>T p.T958Imissense 4VUS (1)VUS favour benign (3)0.000065
56. c.3742_3759dup p.Gly1248_Cys1253dupinframe 4Likely Pathogenic (4)0.000000
57. c.1591G>A p.G531Rmissense 4Likely Pathogenic (1)VUS favour pathogenic (3)0.000017
58. c.2454G>A p.W818Xnonsense 4Pathogenic (4)0.000000
59. c.1790G>A p.R597Qmissense 3VUS (1)VUS favour pathogenic (2)0.000000
60. c.3600_3609delCTGCTGTGCT frameshift 3Pathogenic (3)Pathogenic (0)0.000000
61. c.833delG p.Gly278GlufsX22frameshift 3Pathogenic (2)Pathogenic (1)0.000000
62. c.2450G>A p.R817Qmissense 3VUS favour pathogenic (3)0.000016
63. c.3190+1G>A essential splice site 3Pathogenic (3)0.000000
64. c.2558delG frameshift 3Pathogenic (1)Pathogenic (2)0.000000
65. c.1037G>A p.R346Hmissense 3VUS (1)VUS (2)0.000000
66. c.3233G>A p.W1078Xnonsense 3Pathogenic (3)0.000022
67. c.772+1G>A essential splice site 3Pathogenic (1)Pathogenic (2)0.000000
68. c.177_187del p.Glu60AlafsX49frameshift 3Pathogenic (2)Pathogenic (1)0.000000
69. c.2920C>T p.Q974Xnonsense 3Pathogenic (3)0.000000
70. c.532G>A p.V178Mmissense 3VUS (1)VUS favour pathogenic (2)0.000020
71. c.3624delC frameshift 3Pathogenic (1)Pathogenic (2)0.000000
72. c.355G>A p.E119Kmissense 3VUS (3)0.000000
73. c.1123G>A p.V375Mmissense 3VUS (3)0.000009
74. c.3491-2A>T essential splice site 3Pathogenic (3)0.000000
75. c.1828G>C p.D610Hmissense 3VUS (1)VUS favour benign (2)0.000058
76. c.2308+1G>A essential splice site 3Pathogenic (2)Pathogenic (1)0.000000
77. c.1720C>T p.R574Wmissense 3VUS (3)0.000054
78. c.3129C>A p.Y1043Xnonsense 3Pathogenic (3)0.000000
79. c.2311_2312insG p.Val771GlyfsX62frameshift 3Pathogenic (3)0.000000
80. c.2309-1G>A essential splice site 3Pathogenic (3)0.000000
81. c.3767_3769delCCA p.Thr1256delinframe 3Likely Pathogenic (3)0.000000
82. c.2545del p.Val849Serfs*30frameshift 3Pathogenic (3)0.000000
83. c.3373G>A p.V1125Mmissense 2VUS (1)VUS favour pathogenic (1)0.000022
84. c.25+1G>A essential splice site 2Pathogenic (2)0.000000
85. c.2534_2538delGCGTC frameshift 2Pathogenic (1)Pathogenic (1)0.000000
86. c.3192_3193insC p.Lys1065GlnfsX12frameshift 2Pathogenic (2)0.000000
87. c.3624_3625insC p.Lys1209GlnfsX33frameshift 2Pathogenic (2)0.000000
88. c.1090+1G>A essential splice site 2Pathogenic (1)Pathogenic (1)0.000000
89. c.2943_2947delGACCA frameshift 2Pathogenic (2)0.000000
90. c.999C>G p.Y333Xnonsense 2Pathogenic (2)0.000000
91. c.1766G>A p.R589Hmissense 2VUS (2)0.000000
92. c.3627+1G>T essential splice site 2Pathogenic (2)0.000000
93. c.3005G>A p.R1002Qmissense 2VUS (2)0.000046
94. c.373G>T p.A125Smissense 2VUS (1)VUS (1)0.000000
95. c.1999_2000delinsG p.Leu667AspfsX15frameshift 2Pathogenic (1)Pathogenic (1)0.000000
96. c.557C>T p.P186Lmissense 2VUS (2)0.000047
97. c.818G>A p.R273Hmissense 2VUS (2)0.000042
98. c.844C>T p.R282Wmissense 2Likely Pathogenic (1)VUS favour pathogenic (1)0.000000
99. c.1895delT p.Met632ArgfsX31frameshift 2Pathogenic (2)0.000000
100. c.1038_1042dupCGGCA frameshift 2Pathogenic (1)Pathogenic (1)0.000008
101. c.459delC frameshift 2Pathogenic (1)Pathogenic (1)0.000000
102. c.2882C>T p.P961Lmissense 2VUS (2)0.000048
103. c.3582_3593delGGGCTACACTGC inframe 2Likely Pathogenic (1)0.000000
104. c.2197C>T p.R733Cmissense 2Likely Pathogenic (1)VUS (1)0.000085
105. c.2269G>A p.V757Mmissense 2VUS (1)VUS (1)0.000066
106. c.3752A>G p.Y1251Cmissense 2VUS (2)0.000000
107. c.2524dup p.Tyr842Leufs*42frameshift 2Pathogenic (2)0.000000
108. c.1210C>T p.Q404Xnonsense 2Pathogenic (2)0.000000
109. c.3271del p.Asp1091Metfs*98frameshift 2Pathogenic (2)0.000000
110. c.932C>A p.S311Xnonsense 2Pathogenic (1)Pathogenic (1)0.000000
111. c.3455_3466del p.Ala1152_Lys1155delinframe 2Likely Pathogenic (2)0.000000
112. c.2905+2dup essential splice site 2Likely Pathogenic (2)0.000000
113. c.436_437insA p.Thr146AsnfsX7frameshift 2Pathogenic (2)0.000000
114. c.1869C>A p.C623Xnonsense 2Pathogenic (2)0.000000
115. c.1934C>T p.P645Lmissense 2VUS (2)0.000000
116. c.814C>T p.R272Cmissense 2VUS (2)0.000083
117. c.3470C>T p.P1157Lmissense 2VUS (2)0.000093
118. c.2526C>G p.Y842Xnonsense 2Pathogenic (2)0.000000
119. c.2320G>A p.A774Tmissense 2VUS (2)0.000000
120. c.2300A>G p.K767Rmissense 2VUS (2)0.000016
121. c.1513_1515delAAG inframe 2VUS favour pathogenic (2)0.000000
122. c.1273C>T p.Q425Xnonsense 2Pathogenic (1)Pathogenic (1)0.000000
123. c.1456T>G p.W486Gmissense 2VUS (1)Likely Pathogenic (1)0.000000
124. c.636C>G p.S212Rmissense 2VUS favour pathogenic (2)0.000000
125. c.1090+1G>T essential splice site 2Pathogenic (1)Pathogenic (1)0.000000
126. c.3253G>T p.E1085Xnonsense 2Pathogenic (1)Pathogenic (1)0.000000
127. c.1897+1G>A essential splice site 2Pathogenic (2)0.000000
128. c.1351+1G>A essential splice site 2Pathogenic (1)Pathogenic (1)0.000000
129. c.1021G>A p.G341Smissense 2VUS (1)VUS favour pathogenic (1)0.000025
130. c.2219G>C p.G740Amissense 2VUS (2)0.000000
131. c.126G>A p.W42Xnonsense 2Pathogenic (2)0.000000
132. c.3676C>T p.R1226Cmissense 2VUS (1)VUS (1)0.000058
133. c.2432A>G p.K811Rmissense 2VUS (2)0.000000
134. c.1357_1358delCC frameshift 2Pathogenic (2)0.000000
135. c.1863delC p.Phe621LeufsX42frameshift 2Pathogenic (2)0.000000
136. c.3751T>C p.Y1251Hmissense 2VUS (2)0.000000
137. c.3811C>T p.R1271Xnonsense 2VUS (1)Pathogenic (1)0.000025
138. c.1213A>G p.M405Vmissense 2VUS (1)Pathogenic (1)0.000000
139. c.1841A>G p.Y614Cmissense 2VUS (1)VUS favour pathogenic (1)0.000000
140. c.2953A>T p.K985Xnonsense 2Pathogenic (1)Pathogenic (1)0.000000
141. c.1886T>C p.L629Pmissense 2VUS (2)0.000000
142. c.2449C>T p.R817Wmissense 2VUS (1)VUS (1)0.000000
143. c.747C>A p.C249Xnonsense 2Pathogenic (2)0.000000
144. c.443dup p.Ala149Serfs*4frameshift 2Pathogenic (2)0.000000
145. c.255del p.Ser86Profs*10frameshift 1Pathogenic (1)0.000000
146. c.2249C>T p.T750Mmissense 1Likely Pathogenic (1)0.000024
147. c.3452C>T p.A1151Vmissense 1VUS (1)0.000078
148. c.553_562del p.Lys185Trpfs*12frameshift 1Pathogenic (1)0.000000
149. c.2504G>T p.R835Lmissense 1Likely Pathogenic (1)0.000074
150. c.103C>T p.R35Wmissense 1VUS (1)0.000056
151. c.3614G>A p.R1205Qmissense 1VUS (1)0.000016
152. c.2654C>T p.T885Mmissense 1VUS (1)0.000022
153. c.2737+1G>C essential splice site 1Pathogenic (1)0.000000
154. c.1377delC frameshift 1Pathogenic (1)0.000000
155. c.2048G>A p.W683Xnonsense 1Pathogenic (1)0.000000
156. c.1789C>T p.R597Wmissense 1VUS (1)0.000038
157. c.1021G>C p.G341Rmissense 1VUS (1)0.000000
158. c.3791G>A p.C1264Ymissense 1VUS (1)0.000008
159. c.3792_3793del p.Cys1264*frameshift 1Likely Pathogenic (1)0.000000
160. c.1112C>T p.P371Lmissense 1VUS (1)0.000028
161. c.2149-1G>A essential splice site 1Pathogenic (1)0.000000
162. c.188G>A p.R63Qmissense 1VUS (1)0.000039
163. c.821+1G>C essential splice site 1Pathogenic (1)0.000000
164. c.3364A>T p.T1122Smissense 1Likely Pathogenic (1)0.000000
165. c.3288delG frameshift 1Pathogenic (1)0.000000
166. c.1678delG p.Asp560ThrfsX19frameshift 1Pathogenic (1)0.000000
167. c.799C>G p.L267Vmissense 1VUS (1)0.000080
168. c.2149_2737del p.Leu717Alafs*11frameshift 1Pathogenic (1)0.000000
169. c.2906-2A>G essential splice site 1Pathogenic (1)0.000000
170. c.3614G>C p.R1205Pmissense 1Likely Pathogenic (1)0.000000
171. c.533delT p.Val178GlyfsX7frameshift 1Pathogenic (1)0.000000
172. c.2953A>G p.K985Emissense 1Pathogenic (1)0.000000
173. c.2524_2525insT p.Tyr842LeufsX42frameshift 1Pathogenic (1)0.000000
174. c.1156G>T p.E386Xnonsense 1Pathogenic (1)0.000000
175. c.333_334insT p.E112Xnonsense 1Pathogenic (1)0.000000
176. c.3297dup p.Tyr1100Valfs*49frameshift 1Pathogenic (1)0.000000
177. c.2610_2611insC p.Ser871GlnfsX13frameshift 1Pathogenic (1)0.000000
178. c.2381C>A p.P794Qmissense 1VUS (1)0.000000
179. c.1628delA frameshift 1Pathogenic (1)0.000000
180. c.1523_1525delinsT p.Gln508Leufs*22frameshift 1Pathogenic (1)0.000000
181. c.3065G>A p.R1022Hmissense 1VUS favour pathogenic (1)0.000000
182. c.2603-1G>C essential splice site 1Pathogenic (1)0.000000
183. c.2054_2067+11del p.Lys685Argfs*3frameshift 1Pathogenic (1)0.000000
184. c.2748G>A p.W916Xnonsense 1Pathogenic (1)0.000000
185. c.853G>A p.D285Nmissense 1VUS (1)0.000000
186. c.1223+2T>C essential splice site 1Pathogenic (1)0.000000
187. c.3694A>T p.K1232Xnonsense 1Pathogenic (1)0.000000
188. c.3281A>T p.N1094Imissense 1VUS (1)0.000000
189. c.1404del p.Gln469Serfs*19frameshift 1Pathogenic (1)0.000000
190. c.1778C>T p.S593Fmissense 1VUS favour pathogenic (1)0.000034
191. c.1021_1028del p.Gly341*frameshift 1Pathogenic (1)0.000000
192. c.1418T>C p.F473Smissense 1VUS (1)0.000000
193. c.1731G>C p.W577Cmissense 1VUS (1)0.000000
194. c.121dup p.Arg41Profs*8frameshift 1Pathogenic (1)0.000000
195. c.1090+2T>C essential splice site 1Pathogenic (1)0.000000
196. c.2518G>A p.V840Mmissense 1VUS (1)0.000016
197. c.351_352del p.Gly118Argfs*8frameshift 1Pathogenic (1)0.000000
198. c.3413G>C p.R1138Pmissense 1VUS (1)0.000000
199. c.1672G>A p.A558Tmissense 1VUS (1)0.000008
200. c.3490+1G>A essential splice site 1Pathogenic (1)0.000000
201. c.655-2del essential splice site 1Pathogenic (1)0.000000
202. c.2312T>C p.V771Amissense 1VUS (1)0.000000
203. c.2304_2308+2delCATCGGT essential splice site 1Pathogenic (1)0.000000
204. c.1471G>A p.V491Mmissense 1VUS (1)0.000058
205. c.3083C>G p.T1028Smissense 1VUS (1)0.000000
206. c.3415G>A p.V1139Imissense 1VUS (1)0.000087
207. c.1898-1G>A essential splice site 1Pathogenic (1)0.000000
208. c.1693A>T p.K565Xnonsense 1Pathogenic (1)0.000000
209. c.1685C>T p.A562Vmissense 1VUS (1)0.000008
210. c.1000G>T p.E334Xnonsense 1Pathogenic (1)0.000000
211. c.2723A>G p.Y908Cmissense 1VUS (1)0.000062
212. c.*26+2T>C essential splice site 1Likely Pathogenic (1)0.000000
213. c.1699_1700delGA p.Glu567GlyfsX4frameshift 1Pathogenic (1)0.000000
214. c.1153G>A p.V385Mmissense 1VUS (1)0.000010
215. c.3043dup p.Ala1015Glyfs*36frameshift 1Pathogenic (1)0.000000
216. c.2394_2395insT p.Gly799TrpfsX34frameshift 1Pathogenic (1)0.000000
217. c.148A>G p.S50Gmissense 1VUS (1)0.000038
218. c.3166_3167insG p.Ala1056GlyfsX9frameshift 1Pathogenic (1)0.000000
219. c.3330+1G>C essential splice site 1Pathogenic (1)0.000000
220. c.1591G>C p.G531Rmissense 1VUS favour pathogenic (1)0.000017
221. c.1575T>G p.Y525Xnonsense 1Pathogenic (1)0.000000
222. c.2747G>A p.W916Xnonsense 1Pathogenic (1)0.000000
223. c.3739G>A p.D1247Nmissense 1VUS (1)0.000000
224. c.2188del p.Thr730Profs*24frameshift 1Pathogenic (1)0.000000
225. c.2807dup p.Ala938Glyfs*113frameshift 1Pathogenic (1)0.000000
226. c.2163delC p.Glu722ArgfsX32frameshift 1Pathogenic (1)0.000000
227. c.2429_2503delins23 p.Arg810Profs*10frameshift 1Pathogenic (1)0.000000
228. c.1224-2A>G essential splice site 1Pathogenic (1)0.000000
229. c.3476_3479dupTTAT p.Pro1161TyrfsX9frameshift 1Pathogenic (1)0.000000
230. c.3206C>A p.P1069Hmissense 1Likely Pathogenic (1)0.000000
231. c.2533C>T p.R845Cmissense 1VUS favour pathogenic (1)0.000000
232. c.2690_2696del p.Gly897Glufs*25frameshift 1Pathogenic (1)0.000000
233. c.3735delC frameshift 1Likely Pathogenic (1)0.000000
234. c.2965G>T p.E989Xnonsense 1Pathogenic (1)0.000000
235. c.1455A>T p.K485Nmissense 1VUS (1)0.000000
236. c.2013_2016delinsGG p.Pro672AspfsX20frameshift 1Pathogenic (1)0.000000
237. c.1797del p.His599Glnfs*3frameshift 1Pathogenic (1)0.000000
238. c.1231A>G p.I411Vmissense 1VUS (1)0.000000
239. c.431_432delGT p.Gly144AlafsX8frameshift 1Pathogenic (1)0.000000
240. c.2247C>A p.Y749Xnonsense 1Pathogenic (1)0.000000
241. c.2525A>G p.Y842Cmissense 1VUS (1)0.000000
242. c.391dup p.Ala131Glyfs*22frameshift 1Pathogenic (1)0.000000
243. c.932C>T p.S311Lmissense 1VUS (1)0.000000
244. c.566T>A p.V189Dmissense 1VUS (1)0.000000
245. c.1352_1353del p.Glu451Alafs*23frameshift 1Pathogenic (1)0.000000
246. c.1397T>A p.M466Kmissense 1VUS (1)0.000008
247. c.731del p.Lys244Argfs*56frameshift 1Pathogenic (1)0.000000
248. c.2436G>T p.K812Nmissense 1VUS (1)0.000000
249. c.177dup p.Glu60Argfs*53frameshift 1Pathogenic (1)0.000000
250. c.1120C>T p.Q374Xnonsense 1Pathogenic (1)0.000000
251. c.1960C>T p.R654Cmissense 1VUS favour benign (1)0.000008
252. c.2308+1G>T essential splice site 1Pathogenic (1)0.000000
253. c.2828G>A p.R943Qmissense 1VUS (1)0.000025
254. c.241G>T p.V81Fmissense 1VUS (1)0.000000
255. c.2198G>A p.R733Hmissense 1VUS (1)0.000034
256. c.3316G>A p.D1106Nmissense 1VUS (1)0.000061
257. c.2503C>T p.R835Cmissense 1VUS (1)0.000024
258. c.1A>T p.Met1?missense 1Likely Pathogenic (1)0.000000
259. c.2265C>A p.N755Kmissense 1Pathogenic (1)0.000000
260. c.1303C>T p.Q435Xnonsense 1Pathogenic (1)0.000000
261. c.1624+2T>C essential splice site 1Pathogenic (1)0.000000
262. c.104G>A p.R35Qmissense 1VUS (1)0.000079
263. c.2833_2834delCG frameshift 1Pathogenic (1)0.000000
264. c.3825A>G p.X1275TrpextX77nonsense 1Likely Pathogenic (1)0.000000
265. c.994G>A p.E332Kmissense 1VUS (1)0.000009
266. c.1168delC frameshift 1Pathogenic (1)0.000000
267. c.451G>A p.D151Nmissense 1VUS (1)0.000041
268. c.3357C>A p.Y1119Xnonsense 1Pathogenic (1)0.000000
269. c.743_746delACTG frameshift 1Pathogenic (1)0.000000
270. c.1458-1G>A essential splice site 1Pathogenic (1)0.000000
271. c.187C>T p.R63Wmissense 1VUS (1)0.000077
272. c.3331-1G>A essential splice site 1Pathogenic (1)0.000000
273. c.1586C>G p.T529Smissense 1VUS favour pathogenic (1)0.000000
274. c.2718_2719dup p.Glu907Glyfs*18frameshift 1Pathogenic (1)0.000000
275. c.1343T>C p.F448Smissense 1Likely Pathogenic (1)0.000000
276. c.1924C>T p.Q642Xnonsense 1Pathogenic (1)0.000000
277. c.551_552insT p.Lys185GlufsX56frameshift 1Pathogenic (1)0.000000
278. c.2541C>A p.Y847Xnonsense 1Pathogenic (1)0.000000
279. c.2371C>T p.Q791Xnonsense 1Pathogenic (1)0.000000
280. c.1458G>A p.W486Xnonsense 1Pathogenic (1)0.000000
281. c.3548T>G p.F1183Cmissense 1Likely Pathogenic (1)0.000000
282. c.2584C>T p.Q862Xnonsense 1Pathogenic (1)0.000000
283. c.966G>A p.W322Xnonsense 1Pathogenic (1)0.000000
284. c.2065C>T p.Q689Xnonsense 1Pathogenic (1)0.000000
285. c.1505G>T p.R502Lmissense 1VUS favour pathogenic (1)0.000000
286. c.1569dup p.His524Alafs*7frameshift 1Pathogenic (1)0.000000
287. c.1201C>T p.Q401Xnonsense 1Pathogenic (1)0.000000
288. c.2517_2538del p.Val840ThrfsX32frameshift 1Pathogenic (1)0.000000
289. c.1376_1377del p.Pro459Leufs*15frameshift 1Pathogenic (1)0.000000
290. c.223G>A p.D75Nmissense 1VUS favour pathogenic (1)0.000091
291. c.821+2T>G essential splice site 1Pathogenic (1)0.000000
292. c.611_618delinsT p.Gly204Valfs*94frameshift 1Pathogenic (1)0.000000
293. c.100_110dup p.Val38Serfs*5frameshift 1Pathogenic (1)0.000000
294. c.713G>A p.R238Hmissense 1VUS (1)0.000074
295. c.3617delG frameshift 1Pathogenic (1)0.000000
296. c.2560A>G p.M854Vmissense 1VUS (1)0.000000
297. c.2995-1G>A essential splice site 1Pathogenic (1)0.000000
298. c.256_258del p.Ser86delinframe 1VUS (1)0.000000
299. c.1800delA frameshift 1Pathogenic (1)0.000000
300. c.1072G>A p.D358Nmissense 1VUS (1)0.000008
301. c.3746G>T p.G1249Vmissense 1VUS (1)0.000000
302. c.2905+1G>C essential splice site 1Pathogenic (1)0.000000
303. c.1433C>T p.S478Lmissense 1Likely Pathogenic (1)0.000017
304. c.3098G>A p.R1033Qmissense 1VUS (1)0.000000
305. c.2113_2114insA p.Thr705AsnfsX3frameshift 1Pathogenic (1)0.000000
306. c.506-1G>A essential splice site 1Pathogenic (1)0.000000
307. c.1351+2T>C essential splice site 1Pathogenic (1)0.000000
308. c.811_817delTTCCGCC frameshift 1Pathogenic (1)0.000000
309. c.3068_3069insA p.Asn1023LysfsX28frameshift 1Pathogenic (1)0.000000
310. c.2738-2A>G essential splice site 1Pathogenic (1)0.000000
311. c.2875_2876delAC p.Thr959GlyfsX91frameshift 1Pathogenic (1)0.000000
312. c.3728C>G p.P1243Rmissense 1VUS (1)0.000000
313. c.3690_3691delCA p.Phe1230LeufsX11frameshift 1Pathogenic (1)0.000000
314. c.2968C>G p.P990Amissense 1Likely Pathogenic (1)0.000000
315. c.2437A>T p.K813Xnonsense 1Pathogenic (1)0.000000
316. c.49C>T p.R17Wmissense 1VUS (1)0.000023
317. c.3316del p.Asp1106Thrfs*83frameshift 1Pathogenic (1)0.000000
318. c.3476_3477delTT frameshift 1Pathogenic (1)0.000000
319. c.290C>T p.A97Vmissense 1VUS favour pathogenic (1)0.000000
320. c.2603-2_2603-1delinsGA essential splice site 1Pathogenic (1)0.000000
321. c.3797G>A p.C1266Ymissense 1Likely Pathogenic (1)0.000000
322. c.2161_2168del p.Thr721Profs*23frameshift 1Pathogenic (1)0.000000
323. c.2780_2781delCA frameshift 1Pathogenic (1)0.000000
324. c.993_994insT p.E332Xnonsense 1Pathogenic (1)0.000000
325. c.2789del p.Leu930Argfs*2frameshift 1Pathogenic (1)0.000000
326. c.2528_2536delAGATGCGCG p.Glu843_Arg845delinframe 1Pathogenic (1)0.000000
327. c.2502del p.Arg835Alafs*2frameshift 1Pathogenic (1)0.000000
328. c.2234A>G p.D745Gmissense 1VUS (1)0.000000
329. c.326C>T p.A109Vmissense 1VUS (1)0.000000
330. c.1405C>T p.Q469Xnonsense 1Pathogenic (1)0.000000
331. c.2040_2041insT p.Val681CysfsX12frameshift 1Pathogenic (1)0.000000
332. c.1080G>C p.K360Nmissense 1VUS (1)0.000000
333. c.3580G>A p.A1194Tmissense 1VUS (1)0.000008
334. c.1188G>T p.W396Cmissense 1VUS (1)0.000000
335. c.1756C>G p.P586Amissense 1Likely Pathogenic (1)0.000000
336. c.3335G>A p.W1112Xnonsense 1Pathogenic (1)0.000000
337. c.436A>C p.T146Pmissense 1VUS (1)0.000000
338. c.1224-1G>T essential splice site 1Pathogenic (1)0.000000
339. c.481C>A p.P161Tmissense 1VUS favour pathogenic (1)0.000041
340. c.506-1G>T essential splice site 1Pathogenic (1)0.000000
341. c.3656T>C p.L1219Pmissense 1VUS (1)0.000000
342. c.1097A>C p.Q366Pmissense 1VUS (1)0.000000
343. c.3019T>C p.W1007Rmissense 1VUS (1)0.000000
344. c.365C>A p.A122Dmissense 1VUS (1)0.000000
345. c.931T>A p.S311Tmissense 1VUS (1)0.000000
346. c.1540A>G p.I514Vmissense 1VUS (1)0.000008
347. c.3572C>T p.S1191Lmissense 1VUS (1)0.000016
348. c.701C>A p.T234Nmissense 1Likely Pathogenic (1)0.000000
349. c.1358C>T p.P453Lmissense 1VUS (1)0.000008
350. c.1624+1G>A essential splice site 1Pathogenic (1)0.000000
351. c.3049G>A p.E1017Kmissense 1VUS favour benign (1)0.000085
352. c.2909G>A p.R970Qmissense 1Likely Pathogenic (1)0.000032
353. c.211_212delinsTA p.Val71*frameshift 1Pathogenic (1)0.000000
354. c.2938C>T p.R980Cmissense 1VUS (1)0.000062
355. c.2030C>T p.P677Lmissense 1VUS (1)0.000000
356. c.2170C>T p.R724Wmissense 1VUS (1)0.000019
357. c.3257G>A p.W1086Xnonsense 1Pathogenic (1)0.000021
358. c.3G>C p.Met1?missense 1Likely Pathogenic (1)0.000000
359. c.982delG frameshift 1Pathogenic (1)0.000000
360. c.2557G>A p.G853Smissense 1VUS (1)0.000008
361. c.1291G>A p.D431Nmissense 1VUS (1)0.000028
362. c.631G>A p.D211Nmissense 1VUS (1)0.000009
363. c.1294G>A p.A432Tmissense 1VUS (1)0.000037
364. c.3040delC p.Leu1014TrpfsX6frameshift 1Pathogenic (1)0.000000
365. c.3334_3351del p.Trp1112_Glu1117delinframe 1Likely Pathogenic (1)0.000000
366. c.711C>A p.Y237Xnonsense 1Pathogenic (1)0.000000
367. c.655-1G>A essential splice site 1Pathogenic (1)0.000000
368. c.2737+2T>A essential splice site 1Pathogenic (1)0.000000
369. c.2993A>G p.Q998Rmissense 1VUS favour pathogenic (1)0.000000
370. c.3605G>A p.C1202Ymissense 1Likely Pathogenic (1)0.000000
371. c.146_148delTCA p.Ile49delinframe 1VUS (1)0.000039
372. c.613C>T p.Q205Xnonsense 1Pathogenic (1)0.000000
373. c.2834G>A p.R945Qmissense 1VUS (1)0.000000
374. c.3776delA frameshift 1Pathogenic (1)0.000000
375. c.2512dup p.Glu838Glyfs*46frameshift 1Pathogenic (1)0.000000
376. c.3332_3335dupAGTG p.W1112Xnonsense 1Pathogenic (1)0.000000
377. c.3256T>C p.W1086Rmissense 1VUS (1)0.000000
378. c.2708G>A p.G903Dmissense 1Likely Pathogenic (1)0.000000
379. c.2671C>T p.R891Wmissense 1Likely Pathogenic (1)0.000031
380. c.2641G>A p.V881Imissense 1VUS (1)0.000018
381. c.2939G>A p.R980Hmissense 1VUS (1)0.000000
382. c.1535T>A p.L512Qmissense 1VUS favour pathogenic (1)0.000000
383. c.1266_1267insTGAT p.Ile423*frameshift 1Pathogenic (1)0.000000
384. c.3815-1G>A essential splice site 1Pathogenic (1)0.000000
385. c.1892delT frameshift 1Pathogenic (1)0.000000
386. c.1457G>A p.W486Xnonsense 1Pathogenic (1)0.000000
387. c.3753T>G p.Y1251Xnonsense 1Pathogenic (1)0.000000
388. c.3605delG frameshift 1Pathogenic (1)0.000000
389. c.1950C>G p.D650Emissense 1VUS (1)0.000000
390. c.3713T>C p.L1238Pmissense 1Likely Pathogenic (1)0.000000
391. c.1174G>T p.A392Smissense 1VUS (1)0.000000
392. c.3742G>A p.G1248Rmissense 1VUS (1)0.000033
393. c.518C>A p.T173Nmissense 1VUS (1)0.000000
394. c.1359del p.Val454Cysfs*12frameshift 1Pathogenic (1)0.000000

References

1. Roddy Walsh, Kate L. Thomson, James S. Ware, Birgit H. Funke, Jessica Woodley, Karen J. McGuire, Francesco Mazzarotto, Edward Blair, Anneke Seller, Jenny C. Taylor, Eric V. Minikel, Exome Aggregation Consortium, Daniel G. MacArthur, Martin Farrall, Stuart A. Cook and Hugh Watkins. Reassessment of Mendelian gene pathogenicity using 7,855 cardiomyopathy cases and 60,706 reference samples. Genet Med. 2016 doi:10.1038/gim.2016.90.

2. Alfares AA, Kelly MA, McDermott G, Funke BH, Lebo MS, Baxter SB, Shen J, McLaughlin HM, Clark EH, Babb LJ, Cox SW, DePalma SR, Ho CY, Seidman JG, Seidman CE, Rehm HL. Results of clinical genetic testing of 2,912 probands with hypertrophic cardiomyopathy: expanded panels offer limited additional sensitivity. Genet Med. 2015 Nov;17(11):880-8.