CASQ2 variants in ExAC


The table below lists the CASQ2 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 116311065 c.98G>A p.R33Q missense 0.00000824
2. 116310967 c.196A>G p.T66A missense 0.32650136
3. 116310937 c.226G>A p.V76M missense 0.02505849
4. 116280886 c.491A>G p.Y164C missense 0.00001647
5. 116275561 c.567C>G p.F189L missense 0.00069217
6. 116269619 c.731A>G p.H244R missense 0.00829226
7. 116247829 c.923C>T p.P308L missense 0.00004119
8. 116247826 c.926A>G p.D309G missense 0.00000824
9. 116245571 c.985C>T p.P329S missense 0.00035216
10. 116243928 c.1134T>A p.D378E missense 0.00000826
11. 116243931 c.1131A>T p.E377D missense 0.00015699
12. 116247824 c.928G>A p.D310N missense 0.00063438
13. 116268164 c.748C>T p.R250C missense 0.00004961
14. 116269620 c.730C>T p.H244Y missense 0.00023270
15. 116280874 c.503T>C p.I168T missense 0.00001647
16. 116280895 c.482T>C p.I161T missense 0.00001647
17. 116280896 c.481A>G p.I161V missense 0.00058480
18. 116311098 c.65G>A p.G22E missense 0.00000825
19. 116268163 c.749G>T p.R250L missense 0.00000826
20. 116243896 c.1166A>G p.D389G missense 0.00000825
21. 116244010 c.1052A>G p.D351G missense 0.00008304
22. 116244047 c.1015G>A p.A339T missense 0.00000861
23. 116247875 c.877C>T p.R293W missense 0.00004948
24. 116247878 c.874G>T p.A292S missense 0.00023925
25. 116268154 c.758G>A p.R253H missense 0.00008291
26. 116268160 c.752G>A p.R251H missense 0.00002487
27. 116280896 c.481A>C p.I161L missense 0.00000824
28. 116283431 c.338G>A p.S113N missense 0.00004157
29. 116311152 c.11C>T p.T4I missense 0.00000857
30. 116243866 c.1196A>C p.E399A missense 0.00000824
31. 116243876 c.1186G>A p.D396N missense 0.00008381
32. 116243981 c.1081T>A p.W361R missense 0.00000826
33. 116244016 c.1046A>T p.D349V missense 0.00003333
34. 116245585 c.971T>C p.I324T missense 0.00003556
35. 116247854 c.898G>A p.D300N missense 0.00001648
36. 116247874 c.878G>A p.R293Q missense 0.00003299
37. 116247892 c.860T>A p.I287N missense 0.00001655
38. 116269700 c.650A>G p.Y217C missense 0.00001671
39. 116269717 c.633G>T p.M211I missense 0.00000839
40. 116280902 c.475G>A p.E159K missense 0.00023886
41. 116287503 c.265A>G p.I89V missense 0.00000848
42. 116287511 c.257A>G p.H86R missense 0.00000851
43. 116243897 c.1165G>T p.D389Y missense 0.00001651
44. 116244011 c.1051G>A p.D351N missense 0.00001661
45. 116280902 c.475G>C p.E159Q missense 0.00000824
46. 116247859 c.893A>G p.N298S missense 0.00006593
47. 116283408 c.361C>T p.R121C missense 0.00001652
48. 116243879 c.1183G>A p.D395N missense 0.00000825
49. 116243890 c.1172A>G p.D391G missense 0.00000825
50. 116243912 c.1150A>C p.N384H missense 0.00000829
51. 116243914 c.1148A>G p.D383G missense 0.00009129
52. 116243917 c.1145A>G p.D382G missense 0.00000825
53. 116243936 c.1126G>T p.D376Y missense 0.00000825
54. 116243940 c.1122T>A p.D374E missense 0.00000825
55. 116243965 c.1097T>C p.L366P missense 0.00000825
56. 116243969 c.1093G>C p.V365L missense 0.00000825
57. 116244030 c.1032G>A p.M344I missense 0.00000842
58. 116244031 c.1031T>A p.M344K missense 0.00001684
59. 116244040 c.1022G>A p.S341N missense 0.00000852
60. 116245565 c.991A>T p.I331F missense 0.00000879
61. 116245568 c.988C>G p.Q330E missense 0.00002637
62. 116245574 c.982A>G p.R328G missense 0.00001762
63. 116245607 c.949T>C p.Y317H missense 0.00000932
64. 116245609 c.947C>T p.A316V missense 0.00002870
65. 116245613 c.943G>A p.V315I missense 0.00004837
66. 116247819 c.933T>A p.F311L missense 0.00000824
67. 116247826 c.926A>T p.D309V missense 0.00000824
68. 116247833 c.919G>A p.D307N missense 0.00001648
69. 116247854 c.898G>T p.D300Y missense 0.00000824
70. 116247868 c.884A>G p.N295S missense 0.00000824
71. 116247869 c.883A>T p.N295Y missense 0.00000824
72. 116247877 c.875C>A p.A292D missense 0.00000825
73. 116247882 c.870G>T p.Q290H missense 0.00000825
74. 116247883 c.869A>T p.Q290L missense 0.00003302
75. 116247890 c.862C>G p.L288V missense 0.00000827
76. 116247903 c.849A>C p.E283D missense 0.00001670
77. 116260464 c.835C>T p.P279S missense 0.00000824
78. 116260466 c.833A>G p.D278G missense 0.00000824
79. 116260490 c.809T>C p.I270T missense 0.00000824
80. 116260506 c.793T>G p.L265V missense 0.00000824
81. 116268148 c.764A>G p.E255G missense 0.00000825
82. 116268155 c.757C>A p.R253S missense 0.00000825
83. 116268160 c.752G>T p.R251L missense 0.00000829
84. 116268161 c.751C>T p.R251C missense 0.00000826
85. 116268163 c.749G>A p.R250H missense 0.00000826
86. 116268167 c.745C>G p.L249V missense 0.00000829
87. 116268172 c.740C>G p.P247R missense 0.00000837
88. 116268172 c.740C>T p.P247L missense 0.00000837
89. 116268173 c.739C>T p.P247S missense 0.00000841
90. 116269645 c.705G>T p.E235D missense 0.00000845
91. 116269658 c.692C>T p.P231L missense 0.00000840
92. 116269659 c.691C>A p.P231T missense 0.00000839
93. 116269677 c.673A>G p.I225V missense 0.00001673
94. 116269683 c.667G>A p.E223K missense 0.00000836
95. 116269701 c.649T>C p.Y217H missense 0.00000836
96. 116269710 c.640G>T p.V214F missense 0.00000838
97. 116269711 c.639G>C p.E213D missense 0.00000838
98. 116269718 c.632T>C p.M211T missense 0.00000840
99. 116269728 c.622T>C p.S208P missense 0.00000842
100. 116269735 c.615G>T p.K205N missense 0.00002537
101. 116275523 c.605G>C p.G202A missense 0.00000824
102. 116275539 c.589G>T p.A197S missense 0.00000824
103. 116275547 c.581A>C p.K194T missense 0.00000824
104. 116275550 c.578T>A p.I193N missense 0.00000824
105. 116275565 c.563A>G p.H188R missense 0.00001648
106. 116275572 c.556G>A p.A186T missense 0.00000824
107. 116275581 c.547G>A p.E183K missense 0.00000824
108. 116275587 c.541G>C p.A181P missense 0.00000824
109. 116275587 c.541G>A p.A181T missense 0.00000824
110. 116275595 c.533A>G p.Y178C missense 0.00000824
111. 116280881 c.496A>C p.K166Q missense 0.00000824
112. 116280889 c.488A>T p.D163V missense 0.00000824
113. 116280898 c.479G>A p.R160H missense 0.00003295
114. 116280899 c.478C>T p.R160C missense 0.00001647
115. 116280908 c.469G>C p.A157P missense 0.00001647
116. 116280913 c.464T>C p.V155A missense 0.00000824
117. 116280928 c.449G>T p.S150I missense 0.00000824
118. 116280944 c.433C>T p.P145S missense 0.00002471
119. 116280945 c.432C>G p.D144E missense 0.00000824
120. 116283356 c.413T>C p.L138P missense 0.00000826
121. 116283360 c.409T>C p.F137L missense 0.00001651
122. 116283389 c.380G>A p.G127D missense 0.00000826
123. 116283393 c.376G>C p.D126H missense 0.00000826
124. 116283402 c.367A>G p.I123V missense 0.00000826
125. 116283407 c.362G>A p.R121H missense 0.00002478
126. 116283432 c.337A>C p.S113R missense 0.00000831
127. 116283434 c.335G>A p.G112E missense 0.00001665
128. 116287479 c.289A>G p.K97E missense 0.00000841
129. 116287487 c.281T>C p.V94A missense 0.00001685
130. 116287499 c.269G>A p.G90D missense 0.00000846
131. 116287523 c.245A>G p.Q82R missense 0.00000860
132. 116287533 c.235C>T p.L79F missense 0.00000871
133. 116310934 c.229C>T p.L77F missense 0.00000824
134. 116310950 c.213A>C p.Q71H missense 0.00000824
135. 116310951 c.212A>C p.Q71P missense 0.00000824
136. 116310981 c.182C>T p.S61F missense 0.00000824
137. 116310990 c.173A>T p.E58V missense 0.00004942
138. 116311018 c.145T>C p.Y49H missense 0.00000824
139. 116311019 c.144A>C p.K48N missense 0.00003295
140. 116311030 c.133G>T p.V45F missense 0.00000824
141. 116311048 c.115G>A p.E39K missense 0.00004119
142. 116311060 c.103G>C p.V35L missense 0.00002472
143. 116311071 c.92A>G p.K31R missense 0.00000824
144. 116311083 c.80C>T p.T27I missense 0.00000824
145. 116311086 c.77C>T p.P26L missense 0.00000824
146. 116311099 c.64G>A p.G22R missense 0.00000825
147. 116311129 c.34T>A p.Y12N missense 0.00000832
148. 116311145 c.18G>T p.L6F missense 0.00000845
149. 116311148 c.15C>G p.H5Q missense 0.00000848
150. 116311155 c.8G>C p.R3T missense 0.00000865
151. 116311066 c.97C>T p.R33X nonsense 0.00000824
152. 116244034 c.1028G>A p.Trp343Ter nonsense 0.00001695
153. 116310943 c.220G>T p.Glu74Ter nonsense 0.00000824
154. 116268129 c.783G>A p.W261X nonsense 0.00000825
155. 116269617 c.733C>T p.Q245X nonsense 0.00001822
156. 116280902 c.475G>T p.E159X nonsense 0.00001647
157. 116283343 c.420+6T>C splice site 0.78716546
158. 116247808 c.939+5G>C splice site 0.00000824
159. 116244050 c.1015-3C>T splice site 0.00004335
160. 116245533 c.1014+9C>T splice site 0.00668028
161. 116275601 c.533-6C>T splice site 0.00010718
162. 116283459 c.320-10T>C splice site 0.00000854
163. 116245534 c.1014+8T>A splice site 0.00000909
164. 116245537 c.1014+5G>C splice site 0.00000905
165. 116247806 c.939+7G>T splice site 0.00000824
166. 116247921 c.839-8T>A splice site 0.00000873
167. 116268184 c.738-10_738-5delTTTTTT splice site 0.01099160
168. 116268184 c.738-10_738-8delTTT splice site 0.12500840
169. 116268184 c.738-10_738-9delTT splice site 0.10648739
170. 116268184 c.738-10_738-7delTTTT splice site 0.11119328
171. 116268184 c.738-10_738-6delTTTTT splice site 0.04504202
172. 116268184 c.738-10_738-5delTTTTTTinsTTTTT splice site 0.03198319
173. 116269607 c.737+6T>A splice site 0.00005922
174. 116269607 c.737+6T>C splice site 0.00001974
175. 116269748 c.607-5T>A splice site 0.00000854
176. 116269749 c.607-6T>C splice site 0.00001708
177. 116280954 c.423A>G splice site 0.00000824
178. 116280963 c.421-7A>T splice site 0.00003295
179. 116310926 c.234+3A>G splice site 0.00000824
180. 116260460 c.838+1G>A essential splice site 0.00000824
181. 116269612 c.737+1G>A essential splice site 0.00000941
182. 116260516 c.784-1G>A essential splice site 0.00000824
183. 116280843 c.532+2T>C essential splice site 0.00000824
184. 116310927 c.234+2T>C essential splice site 0.00003295
185. 116275582 c.546delT frameshift 0.00004945
186. 116269710 c.640delG p.Val214LeufsTer28 frameshift 0.00000837
187. 116269732 c.618delA p.Lys206AsnfsTer4 frameshift 0.00000844
188. 116275586 c.542_548delCTTTTGA p.Ala181GlufsTer27 frameshift 0.00000824
189. 116275587 c.541delG p.Ala181LeufsTer29 frameshift 0.00000824
190. 116243915 c.1147_1149delGAT p.Asp383del inframe 0.00042302
191. 116243934 c.1128_1130delTGA p.Asp376del inframe 0.00003305
192. 116243877 c.1185_1187delCGA p.Asp396del inframe 0.00549260
193. 116243868 c.1194_1196dupTGA p.Asp398dup inframe 0.00000824
194. 116243916 c.1146_1147insGAT p.Asp383dup inframe 0.00003318
195. 116243931 c.1131_1139delAGATGATGA p.Glu377_Asp379del inframe 0.00000825
196. 116243931 c.1131_1133delAGA p.Glu377del inframe 0.00000826

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.