PKP2 protein-altering variants in ExAC


The table below lists the PKP2 protein-altering variants found in the ExAC population database with a mean allelic frequency (MAF) less than 0.0001, classified for this study as a rare variant. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 33031931 c.259G>C p.V87L missense 0.00000824
2. 33031405 c.409G>A p.E137K missense 0.00000832
3. 33031341 c.473G>A p.R158K missense 0.00006597
4. 33031101 c.713C>T p.P238L missense 0.00004129
5. 33031089 c.725C>T p.T242M missense 0.00009084
6. 33030886 c.928G>A p.V310M missense 0.00004955
7. 33030831 c.983G>C p.G328A missense 0.00004159
8. 33030832 c.982G>A p.G328R missense 0.00001663
9. 33021904 c.1127T>C p.F376S missense 0.00001647
10. 33021869 c.1162C>T p.R388W missense 0.00000824
11. 33003847 c.1231G>A p.V411I missense 0.00008237
12. 32996161 c.1465G>A p.G489R missense 0.00008684
13. 32993995 c.1655T>G p.F552C missense 0.00001647
14. 32975469 c.1903C>T p.R635W missense 0.00000824
15. 32974373 c.2062T>C p.S688P missense 0.00003296
16. 32955432 c.2204G>A p.R735Q missense 0.00005766
17. 32955378 c.2258T>A p.L753Q missense 0.00000824
18. 32949229 c.2303A>C p.K768T missense 0.00008410
19. 32949098 c.2434G>A p.D812N missense 0.00004942
20. 32949044 c.2488G>C p.A830P missense 0.00000824
21. 32945612 c.2543G>C p.W848S missense 0.00002471
22. 32945603 c.2552C>T p.T851M missense 0.00005766
23. 32955414 c.2222G>T p.G741V missense 0.00000824
24. 32974415 c.2020G>A p.V674M missense 0.00006593
25. 32977076 c.1709C>T p.A570V missense 0.00000824
26. 33003786 c.1292T>C p.L431S missense 0.00000824
27. 33021983 c.1048G>A p.E350K missense 0.00001647
28. 33030804 c.1010G>A p.S337N missense 0.00002526
29. 33030838 c.976G>A p.A326T missense 0.00000830
30. 33030873 c.941G>A p.G314E missense 0.00005784
31. 33030900 c.914G>A p.G305E missense 0.00001651
32. 33031132 c.682G>A p.D228N missense 0.00001649
33. 33031227 c.587G>A p.R196H missense 0.00001648
34. 33031350 c.464G>C p.S155T missense 0.00003299
35. 33049472 c.194C>T p.A65V missense 0.00003207
36. 32974441 c.1994C>G p.P665R missense 0.00002474
37. 32994133 c.1517T>C p.L506P missense 0.00000830
38. 32975529 c.1843T>A p.S615T missense 0.00000824
39. 33030861 c.953A>C p.H318P missense 0.00009923
40. 32945663 c.2492A>G p.Y831C missense 0.00007415
41. 32949068 c.2464A>G p.I822V missense 0.00005766
42. 32949225 c.2307A>T p.E769D missense 0.00000834
43. 32974301 c.2134G>A p.G712R missense 0.00002475
44. 32993981 c.1669A>G p.N557D missense 0.00005766
45. 33021986 c.1045A>G p.M349V missense 0.00003295
46. 33030840 c.974C>T p.A325V missense 0.00001660
47. 33030850 c.964G>T p.G322C missense 0.00007451
48. 33030850 c.964G>A p.G322S missense 0.00001656
49. 33031030 c.784C>A p.L262M missense 0.00002477
50. 33031255 c.559G>A p.A187T missense 0.00006591
51. 33031449 c.365G>A p.R122H missense 0.00000855
52. 32945631 c.2524G>A p.V842I missense 0.00004942
53. 32945651 c.2504A>G p.K835R missense 0.00000824
54. 32955343 c.2293G>C p.E765Q missense 0.00000824
55. 32974358 c.2077A>G p.S693G missense 0.00001649
56. 32975500 c.1872G>T p.E624D missense 0.00006593
57. 32975561 c.1811C>T p.T604M missense 0.00004126
58. 32993978 c.1672G>A p.V558I missense 0.00004119
59. 32994008 c.1642G>T p.G548C missense 0.00001647
60. 33021950 c.1081G>A p.E361K missense 0.00003295
61. 33021967 c.1064G>A p.R355Q missense 0.00002471
62. 33030960 c.854C>T p.A285V missense 0.00001652
63. 33030968 c.846G>C p.Q282H missense 0.00000826
64. 33031065 c.749G>T p.R250L missense 0.00000828
65. 33031095 c.719T>C p.L240P missense 0.00000826
66. 33031216 c.598G>A p.V200M missense 0.00000824
67. 33031877 c.313C>G p.P105A missense 0.00001648
68. 33030874 c.940G>A p.G314R missense 0.00004131
69. 33031203 c.611G>A p.R204H missense 0.00007414
70. 32996172 c.1454G>T p.G485V missense 0.00000936
71. 33030919 c.895C>T p.R299C missense 0.00007431
72. 32996166 c.1460A>G p.Q487R missense 0.00002008
73. 32955364 c.2272C>T p.R758W missense 0.00001648
74. 32975468 c.1904G>A p.R635Q missense 0.00000824
75. 32945392 c.2612G>A p.R871Q missense 0.00005766
76. 33031266 c.548G>A p.S183N missense 0.00009887
77. 32949100 c.2432G>A p.R811H missense 0.00002471
78. 32949166 c.2366T>C p.I789T missense 0.00002472
79. 32949200 c.2332A>G p.I778V missense 0.00004949
80. 32977077 c.1708G>A p.A570T missense 0.00001649
81. 32994035 c.1615C>G p.P539A missense 0.00004119
82. 32996164 c.1462G>A p.G488S missense 0.00008059
83. 32996184 c.1442C>T p.P481L missense 0.00001776
84. 33030790 c.1024T>C p.S342P missense 0.00002566
85. 33030843 c.971C>T p.A324V missense 0.00001659
86. 33030915 c.899C>A p.T300K missense 0.00005780
87. 33031021 c.793G>A p.G265R missense 0.00000826
88. 33031026 c.788C>T p.T263M missense 0.00004129
89. 33031066 c.748C>T p.R250C missense 0.00003305
90. 33031126 c.688G>A p.V230I missense 0.00003300
91. 33031261 c.553C>T p.R185W missense 0.00001648
92. 32945368 c.2636T>C p.L879P missense 0.00001648
93. 32945393 c.2611C>T p.R871W missense 0.00001648
94. 32945398 c.2606A>C p.N869T missense 0.00000824
95. 32945401 c.2603T>A p.V868D missense 0.00000824
96. 32945411 c.2593A>G p.T865A missense 0.00000824
97. 32945585 c.2570A>T p.Y857F missense 0.00000824
98. 32945595 c.2560C>T p.H854Y missense 0.00001647
99. 32945618 c.2537C>T p.S846F missense 0.00003295
100. 32945628 c.2527C>T p.L843F missense 0.00000824
101. 32945648 c.2507C>A p.A836E missense 0.00000824
102. 32945653 c.2502C>G p.N834K missense 0.00000824
103. 32945654 c.2501A>G p.N834S missense 0.00000824
104. 32945660 c.2495C>T p.A832V missense 0.00000824
105. 32949050 c.2482G>A p.G828S missense 0.00008237
106. 32949083 c.2449G>A p.G817R missense 0.00002471
107. 32949101 c.2431C>T p.R811C missense 0.00004118
108. 32949104 c.2428G>A p.A810T missense 0.00000824
109. 32949110 c.2422C>G p.Q808E missense 0.00000824
110. 32949116 c.2416A>G p.S806G missense 0.00000824
111. 32949166 c.2366T>A p.I789N missense 0.00003295
112. 32949179 c.2353A>G p.T785A missense 0.00000824
113. 32949184 c.2348C>T p.P783L missense 0.00000824
114. 32949196 c.2336C>G p.P779R missense 0.00000825
115. 32949197 c.2335C>G p.P779A missense 0.00000825
116. 32949221 c.2311C>G p.L771V missense 0.00000831
117. 32955345 c.2291A>G p.N764S missense 0.00000824
118. 32955346 c.2290A>C p.N764H missense 0.00000824
119. 32955351 c.2285T>C p.L762P missense 0.00001648
120. 32955363 c.2273G>A p.R758Q missense 0.00004943
121. 32955364 c.2272C>G p.R758G missense 0.00000824
122. 32955403 c.2233G>T p.V745L missense 0.00000824
123. 32955425 c.2211G>A p.M737I missense 0.00000824
124. 32955430 c.2206A>G p.K736E missense 0.00000824
125. 32955448 c.2188G>A p.G730S missense 0.00000824
126. 32955466 c.2170G>A p.V724I missense 0.00000824
127. 32955468 c.2168C>T p.T723I missense 0.00000824
128. 32955486 c.2150C>G p.P717R missense 0.00000824
129. 32955487 c.2149C>T p.P717S missense 0.00000824
130. 32974306 c.2129C>T p.T710M missense 0.00006597
131. 32974314 c.2121G>T p.Q707H missense 0.00000824
132. 32974321 c.2114C>T p.A705V missense 0.00000824
133. 32974324 c.2111G>A p.G704E missense 0.00000824
134. 32974345 c.2090A>G p.Y697C missense 0.00001649
135. 32974351 c.2084G>A p.R695H missense 0.00002473
136. 32974355 c.2080G>A p.V694I missense 0.00003297
137. 32974360 c.2075A>G p.K692R missense 0.00000824
138. 32974364 c.2071G>A p.A691T missense 0.00001648
139. 32974380 c.2055G>A p.M685I missense 0.00001648
140. 32974386 c.2049A>G p.I683M missense 0.00000824
141. 32974414 c.2021T>C p.V674A missense 0.00006592
142. 32974429 c.2006G>T p.S669I missense 0.00000824
143. 32974451 c.1984G>A p.V662M missense 0.00001650
144. 32974455 c.1980G>C p.Q660H missense 0.00000825
145. 32974456 c.1979A>G p.Q660R missense 0.00001650
146. 32975415 c.1957A>G p.R653G missense 0.00002473
147. 32975420 c.1952G>A p.R651Q missense 0.00000824
148. 32975424 c.1948A>G p.S650G missense 0.00000824
149. 32975431 c.1941T>G p.C647W missense 0.00001648
150. 32975444 c.1928A>G p.K643R missense 0.00003297
151. 32975446 c.1926C>A p.N642K missense 0.00000824
152. 32975453 c.1919A>G p.D640G missense 0.00000824
153. 32975483 c.1889T>C p.I630T missense 0.00001648
154. 32975484 c.1888A>G p.I630V missense 0.00002472
155. 32975496 c.1876T>A p.Y626N missense 0.00000824
156. 32975511 c.1861G>A p.E621K missense 0.00000824
157. 32975535 c.1837A>C p.N613H missense 0.00000824
158. 32975538 c.1834C>T p.H612Y missense 0.00000824
159. 32975555 c.1817A>G p.N606S missense 0.00000825
160. 32975562 c.1810A>G p.T604A missense 0.00000825
161. 32976987 c.1798G>A p.D600N missense 0.00000824
162. 32976990 c.1795C>A p.P599T missense 0.00000824
163. 32976997 c.1788T>G p.D596E missense 0.00000824
164. 32977031 c.1754C>T p.S585L missense 0.00000824
165. 32977035 c.1750G>C p.D584H missense 0.00000824
166. 32977061 c.1724C>G p.A575G missense 0.00000824
167. 32977074 c.1711G>A p.D571N missense 0.00001649
168. 32977086 c.1699T>A p.S567T missense 0.00000825
169. 32993972 c.1678G>A p.G560R missense 0.00000824
170. 32993990 c.1660A>G p.I554V missense 0.00003295
171. 32993999 c.1651G>A p.D551N missense 0.00003295
172. 32994013 c.1637C>G p.A546G missense 0.00000824
173. 32994017 c.1633A>G p.K545E missense 0.00000824
174. 32994028 c.1622G>T p.G541V missense 0.00000824
175. 32994051 c.1599C>G p.I533M missense 0.00000824
176. 32994062 c.1588A>G p.N530D missense 0.00002473
177. 32994067 c.1583C>T p.T528M missense 0.00002474
178. 32994076 c.1574T>G p.L525R missense 0.00001650
179. 32994083 c.1567G>C p.A523P missense 0.00000825
180. 32994089 c.1561A>G p.T521A missense 0.00000826
181. 32994091 c.1559T>A p.I520K missense 0.00000826
182. 32994092 c.1558A>G p.I520V missense 0.00002479
183. 32994095 c.1555A>G p.M519V missense 0.00000827
184. 32994103 c.1547A>C p.K516T missense 0.00000827
185. 32994139 c.1511G>T p.G504V missense 0.00000830
186. 32996128 c.1498C>T p.P500S missense 0.00004734
187. 32996134 c.1492G>A p.D498N missense 0.00002006
188. 32996139 c.1487T>A p.V496D missense 0.00005050
189. 32996142 c.1484G>A p.G495E missense 0.00001556
190. 32996146 c.1480T>G p.S494A missense 0.00001458
191. 32996167 c.1459C>A p.Q487K missense 0.00000981
192. 32996202 c.1424T>G p.V475G missense 0.00001692
193. 32996211 c.1415C>T p.P472L missense 0.00001677
194. 32996217 c.1409G>C p.G470A missense 0.00000836
195. 32996239 c.1387G>A p.V463I missense 0.00000833
196. 32996241 c.1385C>G p.T462R missense 0.00004164
197. 32996242 c.1384A>G p.T462A missense 0.00001665
198. 33003711 c.1367A>G p.K456R missense 0.00000825
199. 33003727 c.1351G>A p.D451N missense 0.00000824
200. 33003756 c.1322G>A p.R441Q missense 0.00002471
201. 33003757 c.1321C>T p.R441W missense 0.00000824
202. 33003762 c.1316T>G p.V439G missense 0.00001647
203. 33003816 c.1262A>G p.N421S missense 0.00000824
204. 33003879 c.1199T>A p.L400H missense 0.00000824
205. 33003888 c.1190T>A p.I397N missense 0.00002472
206. 33003894 c.1184G>C p.R395P missense 0.00000824
207. 33003895 c.1183C>T p.R395C missense 0.00000825
208. 33003897 c.1181T>A p.L394H missense 0.00001649
209. 33021868 c.1163G>A p.R388Q missense 0.00000824
210. 33021887 c.1144T>C p.F382L missense 0.00001647
211. 33021901 c.1130T>C p.I377T missense 0.00000824
212. 33021917 c.1114G>A p.A372T missense 0.00000824
213. 33021936 c.1095G>T p.M365I missense 0.00000824
214. 33021940 c.1091A>T p.H364L missense 0.00000824
215. 33021950 c.1081G>C p.E361Q missense 0.00000824
216. 33021962 c.1069G>A p.V357M missense 0.00004119
217. 33021978 c.1053G>T p.M351I missense 0.00000824
218. 33030786 c.1028A>G p.Q343R missense 0.00000861
219. 33030801 c.1013C>A p.T338N missense 0.00000844
220. 33030829 c.985A>T p.S329C missense 0.00009981
221. 33030829 c.985A>C p.S329R missense 0.00000832
222. 33030834 c.980G>T p.G327V missense 0.00003325
223. 33030834 c.980G>A p.G327E missense 0.00000831
224. 33030837 c.977C>A p.A326E missense 0.00000831
225. 33030843 c.971C>G p.A324G missense 0.00000829
226. 33030864 c.950C>T p.A317V missense 0.00000827
227. 33030876 c.938G>A p.S313N missense 0.00003304
228. 33030880 c.934T>C p.S312P missense 0.00000826
229. 33030889 c.925G>A p.A309T missense 0.00000826
230. 33030918 c.896G>A p.R299H missense 0.00000826
231. 33030921 c.893C>A p.T298N missense 0.00001651
232. 33030925 c.889A>T p.S297C missense 0.00001651
233. 33030928 c.886C>A p.H296N missense 0.00000826
234. 33030941 c.873T>A p.H291Q missense 0.00000826
235. 33030952 c.862T>C p.S288P missense 0.00000826
236. 33030955 c.859A>G p.R287G missense 0.00000826
237. 33030964 c.850A>G p.R284G missense 0.00000826
238. 33030976 c.838G>A p.V280I missense 0.00003305
239. 33030984 c.830T>C p.L277P missense 0.00000826
240. 33030997 c.817C>T p.P273S missense 0.00000826
241. 33030997 c.817C>G p.P273A missense 0.00000826
242. 33031002 c.812T>G p.V271G missense 0.00000827
243. 33031009 c.805G>A p.G269R missense 0.00000826
244. 33031012 c.802G>T p.V268F missense 0.00000826
245. 33031053 c.761A>C p.N254T missense 0.00000825
246. 33031059 c.755T>C p.M252T missense 0.00000826
247. 33031074 c.740G>A p.G247E missense 0.00001656
248. 33031084 c.730C>G p.P244A missense 0.00009910
249. 33031084 c.730C>T p.P244S missense 0.00000826
250. 33031158 c.656G>A p.R219K missense 0.00000824
251. 33031180 c.634C>T p.R212C missense 0.00000824
252. 33031194 c.620C>G p.T207S missense 0.00002472
253. 33031204 c.610C>T p.R204C missense 0.00004119
254. 33031209 c.605T>C p.V202A missense 0.00002471
255. 33031212 c.602G>A p.G201E missense 0.00001648
256. 33031228 c.586C>T p.R196C missense 0.00001648
257. 33031239 c.575C>T p.P192L missense 0.00001648
258. 33031246 c.568G>C p.V190L missense 0.00001648
259. 33031252 c.562C>G p.L188V missense 0.00001648
260. 33031258 c.556G>A p.A186T missense 0.00000824
261. 33031260 c.554G>A p.R185Q missense 0.00001648
262. 33031272 c.542A>C p.Q181P missense 0.00000824
263. 33031273 c.541C>G p.Q181E missense 0.00000824
264. 33031281 c.533T>C p.L178P missense 0.00001648
265. 33031284 c.530C>T p.T177I missense 0.00000824
266. 33031293 c.521C>T p.A174V missense 0.00000824
267. 33031298 c.516C>A p.S172R missense 0.00001648
268. 33031332 c.482A>G p.Y161C missense 0.00000824
269. 33031347 c.467C>T p.P156L missense 0.00000825
270. 33031353 c.461G>A p.S154N missense 0.00000825
271. 33031357 c.457G>A p.D153N missense 0.00000825
272. 33031364 c.450T>G p.I150M missense 0.00000825
273. 33031400 c.414A>T p.E138D missense 0.00007474
274. 33031408 c.406G>T p.V136L missense 0.00007501
275. 33031449 c.365G>T p.R122L missense 0.00000855
276. 33031450 c.364C>T p.R122C missense 0.00000855
277. 33031455 c.359A>C p.E120A missense 0.00000857
278. 33031864 c.326A>T p.D109V missense 0.00000824
279. 33031865 c.325G>A p.D109N missense 0.00000824
280. 33031870 c.320C>T p.T107I missense 0.00000824
281. 33031877 c.313C>T p.P105S missense 0.00000824
282. 33031891 c.299G>A p.G100D missense 0.00000824
283. 33031892 c.298G>A p.G100S missense 0.00001648
284. 33031897 c.293T>C p.V98A missense 0.00000824
285. 33031902 c.288T>G p.D96E missense 0.00003296
286. 33031915 c.275T>C p.L92S missense 0.00000824
287. 33031916 c.274T>G p.L92V missense 0.00001648
288. 33031940 c.250C>T p.P84S missense 0.00000825
289. 33031954 c.236G>A p.R79Q missense 0.00001651
290. 33031960 c.230T>A p.L77H missense 0.00000827
291. 33049443 c.223G>A p.G75R missense 0.00002480
292. 33049444 c.222C>G p.N74K missense 0.00001238
293. 33049457 c.209G>C p.S70T missense 0.00001134
294. 33049458 c.208A>G p.S70G missense 0.00001126
295. 33049499 c.167T>C p.I56T missense 0.00001110
296. 33049508 c.158G>A p.S53N missense 0.00001195
297. 33049520 c.146A>G p.Q49R missense 0.00002829
298. 33049530 c.136C>A p.R46S missense 0.00003098
299. 33049535 c.131G>A p.S44N missense 0.00001632
300. 33049556 c.110A>G p.K37R missense 0.00001943
301. 33049588 c.78C>A p.D26E missense 0.00003080
302. 33049589 c.77A>G p.D26G missense 0.00003089
303. 33049610 c.56A>C p.Q19P missense 0.00008414
304. 33031151 c.663C>A p.Y221X nonsense 0.00000824
305. 33003841 c.1237C>T p.R413X nonsense 0.00001647
306. 32994037 c.1613G>A p.W538X nonsense 0.00001648
307. 32975421 c.1951C>T p.R651X nonsense 0.00000824
308. 32974457 c.1978C>T p.Q660X nonsense 0.00000825
309. 32996137 c.1489C>T p.R497X nonsense 0.00003606
310. 33021968 c.1063C>T p.R355X nonsense 0.00000824
311. 32945376 c.2628C>A p.Y876X nonsense 0.00000824
312. 32974361 c.2074A>T p.K692X nonsense 0.00000824
313. 32996122 c.1504C>T p.Q502X nonsense 0.00002854
314. 33031006 c.808C>T p.Q270X nonsense 0.00001652
315. 33031445 c.369G>A p.W123X nonsense 0.00000853
316. 32977097 c.1689-1G>C essential splice site 0.00000826
317. 32955491 c.2146-1G>C essential splice site 0.00004944
318. 32949042 c.2489+1G>A essential splice site 0.00002471
319. 32994140 c.1511-1G>T essential splice site 0.00000830
320. 33003698 c.1378+2T>A essential splice site 0.00000826
321. 32975551 c.1821dupT frameshift 0.00000825
322. 32975497 c.1875delA p.Lys625AsnfsTer31 frameshift 0.00000824
323. 32996151 c.1475_1476insCT p.Arg493Ter frameshift 0.00002799
324. 33030843 c.971_972insCT p.Ala325TrpfsTer28 frameshift 0.00004148
325. 33030846 c.968_969delAG p.Gln323ArgfsTer12 frameshift 0.00004145
326. 33031210 c.604delG p.Val202SerfsTer61 frameshift 0.00000824
327. 32975446 c.1926_1928delCAA inframe 0.00001648

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.