VCL variants in ExAC


The table below lists the VCL variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 75871722 c.2801C>T p.A934V missense 0.01213420
2. 75874667 c.3258+10A>T splice site 0.00371424
3. 75863580 c.2025G>A p.V675V splice site 0.00253711
4. 75860740 c.1907A>G p.H636R missense 0.00149155
5. 75854218 c.1542C>T p.V514V splice site 0.00121003
6. 75867074 c.2521G>C p.D841H missense 0.00099002
7. 75849088 c.1157A>G p.K386R missense 0.00075891
8. 75855425 c.1555A>C p.I519L missense 0.00071702
9. 75832614 c.622+4C>T splice site 0.00058493
10. 75830746 c.404T>C p.I135T missense 0.00057810
11. 75860806 c.1973T>C p.V658A missense 0.00046783
12. 75855445 c.1575A>C p.E525D missense 0.00045320
13. 75871782 c.2861_2863delTGT p.L954_L955delinsL inframe 0.00042836
14. 75873961 c.2969C>T p.A990V missense 0.00041266
15. 75849841 c.1237G>A p.A413T missense 0.00023890
16. 75832578 c.590C>T p.T197I missense 0.00023067
17. 75871748 c.2827C>G p.P943A missense 0.00018125
18. 75855619 c.1743+6A>T splice site 0.00014976
19. 75867025 c.2472C>G p.I824M missense 0.00014835
20. 75849898 c.1294C>G p.L432V missense 0.00014827
21. 75868729 c.2560C>T splice site 0.00013205
22. 75871844 c.2923C>T p.R975W missense 0.00013183
23. 75855477 c.1607C>A p.P536H missense 0.00012361
24. 75849901 c.1297C>T p.R433C missense 0.00009885
25. 75848981 c.1050G>A p.M350I missense 0.00009152
26. 75855591 c.1721C>T p.S574F missense 0.00009094
27. 75864950 c.2273G>A p.R758H missense 0.00009067
28. 75855491 c.1621C>G p.L541V missense 0.00009066
29. 75854181 c.1505G>A p.R502Q missense 0.00008514
30. 75854079 c.1403C>T p.T468M missense 0.00008265
31. 75757997 c.32G>A p.S11N missense 0.00008135
32. 75758140 c.168+7G>T splice site 0.00008134
33. 75867084 c.2531C>T p.P844L missense 0.00007427
34. 75856974 c.1756C>T p.R586W missense 0.00007416
35. 75849796 c.1192C>T p.P398S missense 0.00007416
36. 75855619 c.1743+6A>G splice site 0.00006656
37. 75842215 c.787A>T p.T263S missense 0.00006613
38. 75854066 c.1390A>G p.K464E missense 0.00006611
39. 75834566 c.688C>T p.R230C missense 0.00006598
40. 75849776 c.1177-5T>C splice site 0.00006593
41. 75849961 c.1352+5G>A splice site 0.00006592
42. 75863601 c.2046A>T p.L682F missense 0.00006589
43. 75758123 c.158A>G p.N53S missense 0.00006433
44. 75874626 c.3227G>A p.R1076Q missense 0.00006212
45. 75854187 c.1511T>C p.I504T missense 0.00006017
46. 75860784 c.1951G>A p.G651S missense 0.00005887
47. 75871845 c.2924G>A p.R975Q missense 0.00005768
48. 75849799 c.1195A>C p.N399H missense 0.00005768
49. 75860839 c.2006G>T p.R669L missense 0.00005356
50. 75860773 c.1940C>T p.A647V missense 0.00005027
51. 75860761 c.1928C>T p.T643M missense 0.00004994
52. 75830422 c.240-6_240-5insT splice site 0.00004943
53. 75758095 c.130G>A p.V44M missense 0.00004500
54. 75854166 c.1490T>C p.I497T missense 0.00004192
55. 75843268 c.1019C>T p.A340V missense 0.00004192
56. 75848971 c.1040C>T p.P347L missense 0.00004169
57. 75871659 c.2746-8C>T splice site 0.00004167
58. 75802834 c.169-7C>G splice site 0.00004150
59. 75854052 c.1376C>G p.A459G missense 0.00004131
60. 75842257 c.829C>A p.L277M missense 0.00004126
61. 75849064 c.1133C>T p.T378I missense 0.00004125
62. 75871695 c.2774_2779delTAGGTG p.Gly926_Val927del inframe 0.00004124
63. 75855476 c.1606C>A p.P536T missense 0.00004120
64. 75832614 c.622+4C>G splice site 0.00004119
65. 75863585 c.2030C>T p.S677L missense 0.00004119
66. 75871749 c.2828_2829delCT p.Pro943ArgfsTer9 frameshift 0.00004119
67. 75832553 c.565G>T p.V189L missense 0.00004119
68. 75854211 c.1535G>A p.R512H missense 0.00003732
69. 75854210 c.1534C>T p.R512C missense 0.00003697
70. 75848962 c.1031G>C p.G344A missense 0.00003338
71. 75865078 c.2401G>A p.A801T missense 0.00003306
72. 75865055 c.2378C>A p.T793N missense 0.00003299
73. 75871719 c.2798C>T p.A933V missense 0.00003298
74. 75855497 c.1627G>A p.A543T missense 0.00003297
75. 75849802 c.1198G>T p.G400C missense 0.00003296
76. 75871788 c.2867T>G p.M956R missense 0.00003295
77. 75860802 c.1969A>G p.T657A missense 0.00002544
78. 75843264 c.1015C>T p.R339C missense 0.00002508
79. 75834503 c.625A>T p.M209L missense 0.00002506
80. 75855617 c.1743+4G>A splice site 0.00002494
81. 75843255 c.1006G>A p.A336T missense 0.00002493
82. 75871667 c.2746C>T p.P916S missense 0.00002489
83. 75854109 c.1433A>G p.N478S missense 0.00002483
84. 75842216 c.788C>G p.T263S missense 0.00002480
85. 75854070 c.1394A>C p.Q465P missense 0.00002480
86. 75830840 c.498A>G splice site 0.00002479
87. 75865066 c.2389A>G p.M797V missense 0.00002478
88. 75855583 c.1713delA p.A573Hfs*8 frameshift 0.00002478
89. 75802920 c.239+9T>C splice site 0.00002477
90. 75849046 c.1115G>T p.R372L missense 0.00002477
91. 75857074 c.1856C>T p.A619V missense 0.00002477
92. 75802917 c.239+6T>G splice site 0.00002476
93. 75842251 c.823T>G p.S275A missense 0.00002475
94. 75857062 c.1844C>T p.A615V missense 0.00002475
95. 75830814 c.472G>T p.V158F missense 0.00002474
96. 75867068 c.2515G>A p.E839K missense 0.00002474
97. 75834567 c.689G>A p.R230H missense 0.00002474
98. 75849775 c.1177-6G>C splice site 0.00002473
99. 75877895 c.3373C>T p.R1125C missense 0.00002473
100. 75871827 c.2906C>T p.A969V missense 0.00002472
101. 75867021 c.2468G>A p.R823Q missense 0.00002472
102. 75843201 c.952C>T p.R318C missense 0.00002472
103. 75868799 c.2630C>T p.P877L missense 0.00002472
104. 75877789 c.3267G>C p.E1089D missense 0.00002472
105. 75871803 c.2882C>A p.P961Q missense 0.00002471
106. 75830424 c.240-4A>G splice site 0.00002471
107. 75849891 c.1287T>A p.D429E missense 0.00002471
108. 75758032 c.67C>A p.L23M missense 0.00002375
109. 75874662 c.3258+5G>A splice site 0.00002288
110. 75874547 c.3154-6C>G splice site 0.00001944
111. 75874547 c.3154-6C>T splice site 0.00001944
112. 75874548 c.3154-5T>G splice site 0.00001895
113. 75874643 c.3244_3246delGAG p.Glu1082del inframe 0.00001808
114. 75874550 c.3154-3T>C splice site 0.00001787
115. 75843274 c.1022+3A>T splice site 0.00001686
116. 75834503 c.625A>G p.M209V missense 0.00001671
117. 75874151 c.3153+6C>T splice site 0.00001669
118. 75854152 c.1476C>G p.H492Q missense 0.00001668
119. 75848977 c.1046C>T p.A349V missense 0.00001665
120. 75871660 c.2746-7G>A splice site 0.00001665
121. 75834519 c.641C>T p.T214I missense 0.00001662
122. 75865105 c.2428G>A p.D810N missense 0.00001657
123. 75864859 c.2182G>A p.E728K missense 0.00001655
124. 75854100 c.1424C>A p.T475N missense 0.00001654
125. 75854078 c.1402A>G p.T468A missense 0.00001653
126. 75849045 c.1114C>T p.R372C missense 0.00001652
127. 75842281 c.853C>T p.R285C missense 0.00001651
128. 75802910 c.238A>C p.K80Q missense 0.00001651
129. 75842234 c.806C>G p.A269G missense 0.00001651
130. 75802896 c.224C>T p.P75L missense 0.00001650
131. 75867081 c.2528C>T p.P843L missense 0.00001650
132. 75864952 c.2275C>T p.R759W missense 0.00001649
133. 75874043 c.3051G>C p.Q1017H missense 0.00001649
134. 75871784 c.2863T>A p.L955I missense 0.00001648
135. 75866997 c.2444A>G p.K815R missense 0.00001648
136. 75849829 c.1225C>T p.R409X nonsense 0.00001648
137. 75871724 c.2803G>A p.D935N missense 0.00001648
138. 75849851 c.1247G>A p.R416Q missense 0.00001648
139. 75855453 c.1583G>A p.R528H missense 0.00001648
140. 75871826 c.2905G>A p.A969T missense 0.00001648
141. 75871772 c.2851C>T p.P951S missense 0.00001648
142. 75832551 c.563G>A p.R188Q missense 0.00001648
143. 75843190 c.941C>A p.A314E missense 0.00001648
144. 75855483 c.1613G>A p.R538Q missense 0.00001648
145. 75871728 c.2807C>T p.A936V missense 0.00001648
146. 75832614 c.622+4C>A splice site 0.00001648
147. 75856975 c.1757G>A p.R586Q missense 0.00001648
148. 75866991 c.2438T>C p.L813P missense 0.00001648
149. 75871814 c.2893C>T p.P965S missense 0.00001648
150. 75871748 c.2827C>A p.P943T missense 0.00001648
151. 75849850 c.1246C>T p.R416W missense 0.00001648
152. 75832499 c.511A>G p.M171V missense 0.00001648
153. 75830470 c.282G>A p.M94I missense 0.00001647
154. 75863657 c.2102A>C p.Q701P missense 0.00001647
155. 75849872 c.1268A>G p.D423G missense 0.00001647
156. 75830465 c.277C>T p.Q93X nonsense 0.00001647
157. 75874625 c.3226C>T p.R1076W missense 0.00001529
158. 75758046 c.81_82insG p.Glu28GlyfsTer12 frameshift 0.00001460
159. 75757999 c.34A>G p.I12V missense 0.00001016
160. 75757985 c.20G>T p.R7L missense 0.00001007
161. 75854223 c.1543+4A>G splice site 0.00000989
162. 75860855 c.2022G>A splice site 0.00000937
163. 75854211 c.1535G>T p.R512L missense 0.00000933
164. 75860839 c.2006G>A p.R669Q missense 0.00000893
165. 75860838 c.2005C>T p.R669X nonsense 0.00000892
166. 75860826 c.1993G>C p.V665L missense 0.00000870
167. 75854180 c.1504C>T p.R502W missense 0.00000851
168. 75860803 c.1970C>T p.T657I missense 0.00000850
169. 75854178 c.1502A>G p.Q501R missense 0.00000849
170. 75864818 c.2141A>G p.D714G missense 0.00000839
171. 75874152 c.3153+7G>A splice site 0.00000838
172. 75860770 c.1937A>C p.K646T missense 0.00000836
173. 75848961 c.1030G>A p.G344R missense 0.00000835
174. 75860766 c.1933G>A p.E645K missense 0.00000834
175. 75843262 c.1013_1014insCC p.Arg339ProfsTer40 frameshift 0.00000834
176. 75848970 c.1039C>T p.P347S missense 0.00000834
177. 75848976 c.1045G>A p.A349T missense 0.00000833
178. 75834513 c.635T>C p.F212S missense 0.00000832
179. 75848980 c.1049T>C p.M350T missense 0.00000832
180. 75843256 c.1007C>T p.A336V missense 0.00000831
181. 75871662 c.2746-5C>T splice site 0.00000831
182. 75860754 c.1921G>A p.G641S missense 0.00000831
183. 75860698 c.1873-8T>G splice site 0.00000831
184. 75860702 c.1873-4C>T splice site 0.00000830
185. 75842310 c.874+8T>C splice site 0.00000830
186. 75860748 c.1915A>C p.K639Q missense 0.00000830
187. 75842309 c.874+7C>G splice site 0.00000830
188. 75871669 c.2748G>A splice site 0.00000829
189. 75868922 c.2745+8G>A splice site 0.00000829
190. 75865109 c.2432C>G p.P811R missense 0.00000829
191. 75802837 c.169-4G>A splice site 0.00000829
192. 75860734 c.1901A>C p.E634A missense 0.00000828
193. 75834531 c.653_654insA p.N220Kfs*21 frameshift 0.00000828
194. 75873936 c.2950-6C>T splice site 0.00000828
195. 75854111 c.1435C>T p.R479W missense 0.00000828
196. 75860721 c.1888G>A p.A630T missense 0.00000828
197. 75855588 c.1718C>G p.A573G missense 0.00000827
198. 75865091 c.2414C>T p.A805V missense 0.00000827
199. 75802857 c.185T>C p.V62A missense 0.00000827
200. 75857097 c.1872+7A>G splice site 0.00000827
201. 75857089 c.1871A>T p.E624V missense 0.00000827
202. 75802856 c.184G>A p.V62I missense 0.00000827
203. 75865084 c.2407G>A p.A803T missense 0.00000827
204. 75854103 c.1427A>G p.K476R missense 0.00000827
205. 75874106 c.3114G>C p.K1038N missense 0.00000827
206. 75865084 c.2407G>C p.A803P missense 0.00000827
207. 75868888 c.2719G>T p.D907Y missense 0.00000826
208. 75857081 c.1863C>G p.N621K missense 0.00000826
209. 75865073 c.2396T>C p.M799T missense 0.00000826
210. 75854031 c.1355G>T p.G452V missense 0.00000826
211. 75867110 c.2557C>G p.R853G missense 0.00000826
212. 75857079 c.1861A>G p.N621D missense 0.00000826
213. 75834665 c.783+4C>T splice site 0.00000826
214. 75857059 c.1841C>T p.T614M missense 0.00000826
215. 75867092 c.2539C>T p.P847S missense 0.00000826
216. 75857083 c.1865G>A p.R622K missense 0.00000826
217. 75849112 c.1176+5T>C splice site 0.00000826
218. 75802869 c.197A>G p.E66G missense 0.00000826
219. 75842291 c.863G>C p.S288T missense 0.00000826
220. 75834666 c.783+5G>A splice site 0.00000826
221. 75865072 c.2395A>G p.M799V missense 0.00000826
222. 75871682 c.2761G>A p.A921T missense 0.00000826
223. 75874083 c.3091C>T p.R1031W missense 0.00000826
224. 75868897 c.2728C>G p.R910G missense 0.00000826
225. 75865070 c.2393T>C p.V798A missense 0.00000826
226. 75873967 c.2975A>G p.K992R missense 0.00000825
227. 75871707 c.2786C>T p.A929V missense 0.00000825
228. 75874043 c.3051G>T p.Q1017H missense 0.00000825
229. 75865063 c.2386C>T p.P796S missense 0.00000825
230. 75864896 c.2219C>T p.A740V missense 0.00000825
231. 75864918 c.2241G>C p.Q747H missense 0.00000825
232. 75842240 c.812C>T p.A271V missense 0.00000825
233. 75834652 c.774G>A p.W258X nonsense 0.00000825
234. 75849052 c.1121T>C p.L374P missense 0.00000825
235. 75874059 c.3067G>A p.A1023T missense 0.00000825
236. 75864914 c.2237C>A p.P746H missense 0.00000825
237. 75842255 c.827A>G p.K276R missense 0.00000825
238. 75868729 c.2560C>A p.L854I missense 0.00000825
239. 75865042 c.2365G>A p.E789K missense 0.00000825
240. 75830824 c.482C>T p.T161I missense 0.00000825
241. 75874018 c.3026G>T p.S1009I missense 0.00000825
242. 75842245 c.817A>C p.I273L missense 0.00000825
243. 75830754 c.412T>G p.C138G missense 0.00000825
244. 75855560 c.1690G>T p.G564W missense 0.00000825
245. 75842272 c.844G>T p.G282C missense 0.00000825
246. 75868866 c.2697G>T p.M899I missense 0.00000825
247. 75802891 c.219T>A p.D73E missense 0.00000825
248. 75842246 c.818T>C p.I273T missense 0.00000825
249. 75865048 c.2371A>C p.S791R missense 0.00000825
250. 75842237 c.809T>C p.L270S missense 0.00000825
251. 75864883 c.2206A>G p.K736E missense 0.00000825
252. 75871835 c.2914T>A p.S972T missense 0.00000824
253. 75865015 c.2338C>T p.R780C missense 0.00000824
254. 75855469 c.1599G>C p.M533I missense 0.00000824
255. 75843172 c.923A>T p.K308I missense 0.00000824
256. 75855429 c.1559G>T p.R520L missense 0.00000824
257. 75863649 c.2094G>A p.M698I missense 0.00000824
258. 75834624 c.746A>G p.Q249R missense 0.00000824
259. 75849896 c.1292T>G p.I431S missense 0.00000824
260. 75832573 c.585G>A p.M195I missense 0.00000824
261. 75849913 c.1309G>A p.E437K missense 0.00000824
262. 75857034 c.1816A>G p.I606V missense 0.00000824
263. 75855497 c.1627G>T p.A543S missense 0.00000824
264. 75871827 c.2906C>A p.A969E missense 0.00000824
265. 75871754 c.2833A>G p.M945V missense 0.00000824
266. 75834579 c.701T>C p.V234A missense 0.00000824
267. 75868748 c.2579C>T p.P860L missense 0.00000824
268. 75832536 c.548C>T p.T183I missense 0.00000824
269. 75832492 c.504G>A p.M168I missense 0.00000824
270. 75857025 c.1807A>T p.T603S missense 0.00000824
271. 75877841 c.3319C>T p.R1107W missense 0.00000824
272. 75866998 c.2445G>C p.K815N missense 0.00000824
273. 75843124 c.875G>A p.G292E missense 0.00000824
274. 75871874 c.2949+4C>T splice site 0.00000824
275. 75873999 c.3007C>T p.R1003W missense 0.00000824
276. 75865030 c.2353G>A p.A785T missense 0.00000824
277. 75855476 c.1606C>T p.P536S missense 0.00000824
278. 75843177 c.928G>A p.G310S missense 0.00000824
279. 75871797 c.2876A>G p.N959S missense 0.00000824
280. 75856983 c.1765G>A p.E589K missense 0.00000824
281. 75871787 c.2866A>C p.M956L missense 0.00000824
282. 75832609 c.621A>T splice site 0.00000824
283. 75849916 c.1312A>T p.I438L missense 0.00000824
284. 75849902 c.1298G>A p.R433H missense 0.00000824
285. 75832580 c.592G>T p.V198L missense 0.00000824
286. 75871796 c.2875A>C p.N959H missense 0.00000824
287. 75830501 c.313C>T p.R105X nonsense 0.00000824
288. 75871746 c.2825C>A p.P942H missense 0.00000824
289. 75849813 c.1209_1211delAGG p.Gly404del inframe 0.00000824
290. 75867054 c.2501C>G p.A834G missense 0.00000824
291. 75849809 c.1205C>T p.P402L missense 0.00000824
292. 75877778 c.3259-3C>T splice site 0.00000824
293. 75855509 c.1639C>T p.R547X nonsense 0.00000824
294. 75843217 c.968G>A p.G323E missense 0.00000824
295. 75871829 c.2908G>C p.A970P missense 0.00000824
296. 75864982 c.2305A>G p.R769G missense 0.00000824
297. 75834582 c.704A>G p.E235G missense 0.00000824
298. 75877774 c.3259-7C>T splice site 0.00000824
299. 75863593 c.2038C>T p.R680C missense 0.00000824
300. 75832496 c.508A>G p.K170E missense 0.00000824
301. 75868784 c.2615C>T p.P872L missense 0.00000824
302. 75849862 c.1258G>A p.E420K missense 0.00000824
303. 75877862 c.3340A>G p.I1114V missense 0.00000824
304. 75867017 c.2464T>C p.Y822H missense 0.00000824
305. 75857025 c.1807A>C p.T603P missense 0.00000824
306. 75830460 c.272C>A p.A91E missense 0.00000824
307. 75863590 c.2035G>T p.A679S missense 0.00000824
308. 75871845 c.2924G>T p.R975L missense 0.00000824
309. 75855495 c.1625T>C p.L542P missense 0.00000824
310. 75877770 c.3259-11T>C splice site 0.00000824
311. 75843137 c.888G>T p.E296D missense 0.00000824
312. 75871803 c.2882C>T p.P961L missense 0.00000824
313. 75849938 c.1334T>C p.L445S missense 0.00000824
314. 75849905 c.1301C>A p.S434Y missense 0.00000824
315. 75832580 c.592G>A p.V198M missense 0.00000824
316. 75849829 c.1225C>G p.R409G missense 0.00000824
317. 75871773 c.2852C>G p.P951R missense 0.00000824
318. 75849857 c.1253T>C p.I418T missense 0.00000824
319. 75855510 c.1640G>A p.R547Q missense 0.00000824
320. 75866982 c.2435-6G>A splice site 0.00000824
321. 75871830 c.2909C>G p.A970G missense 0.00000824
322. 75864962 c.2285G>A p.R762Q missense 0.00000824
323. 75855467 c.1597A>G p.M533V missense 0.00000824
324. 75871776 c.2855A>G p.E952G missense 0.00000824
325. 75834597 c.719A>C p.E240A missense 0.00000824
326. 75855410 c.1544-4C>T splice site 0.00000824
327. 75832515 c.527A>G p.D176G missense 0.00000824
328. 75849774 c.1177-7T>C splice site 0.00000824
329. 75832553 c.565G>C p.V189L missense 0.00000824
330. 75864950 c.2273G>C p.R758P missense 0.00000824
331. 75843196 c.947A>C p.K316T missense 0.00000824
332. 75867020 c.2467C>T p.R823W missense 0.00000824
333. 75857025 c.1807A>G p.T603A missense 0.00000824
334. 75843198 c.949G>C p.E317Q missense 0.00000824
335. 75855490 c.1620T>G p.D540E missense 0.00000824
336. 75864945 c.2268T>G p.I756M missense 0.00000824
337. 75871796 c.2875A>G p.N959D missense 0.00000824
338. 75871721 c.2800G>A p.A934T missense 0.00000824
339. 75849950 c.1346G>T p.R449L missense 0.00000824
340. 75849799 c.1195A>G p.N399D missense 0.00000824
341. 75830797 c.455A>G p.E152G missense 0.00000824
342. 75868745 c.2576C>T p.A859V missense 0.00000824
343. 75877827 c.3305T>C p.V1102A missense 0.00000824
344. 75857011 c.1793T>C p.V598A missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.