Paralogue Annotation for CACNA1C residue 1120

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 1120
Reference Amino Acid: L - Leucine
Protein Domain: TM domain 3


Paralogue Variants mapped to CACNA1C residue 1120

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN1AI1437MDravet syndromeMedium9 18930999

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CSWENSKFDFDNVLAAMMALFTVSTFEGWPE>L<LYRSIDSHTEDKGPIYNYRVEISIFFIIYI1150
CACNA1AEWKKYEFHYDNVLWALLTLFTVSTGEGWPQ>V<LKHSVDATFENQGPSPGYRMEMSIFYVVYF1495
CACNA1BQWKKYDFHYDNVLWALLTLFTVSTGEGWPM>V<LKHSVDATYEEQGPSPGYRMELSIFYVVYF1401
CACNA1DIWQNSDFNFDNVLSAMMALFTVSTFEGWPA>L<LYKAIDSNGENIGPIYNHRVEISIFFIIYI1156
CACNA1EEWKRHEFHYDNIIWALLTLFTVSTGEGWPQ>V<LQHSVDVTEEDRGPSRSNRMEMSIFYVVYF1407
CACNA1FLWVNSDFNFDNVLSAMMALFTVSTFEGWPA>L<LYKAIDAYAEDHGPIYNYRVEISVFFIVYI1121
CACNA1GRWVRHKYNFDNLGQALMSLFVLASKDGWVD>I<MYDGLDAVGVDQQPIMNHNPWMLLYFISFL1521
CACNA1HRWVRRKYNFDNLGQALMSLFVLSSKDGWVN>I<MYDGLDAVGVDQQPVQNHNPWMLLYFISFL1539
CACNA1IRWVHHKYNFDNLGQALMSLFVLASKDGWVN>I<MYNGLDAVAVDQQPVTNHNPWMLLYFISFL1415
CACNA1SEWVHSDFHFDNVLSAMMSLFTVSTFEGWPQ>L<LYKAIDSNAEDVGPIYNNRVEMAIFFIIYI1049
SCN10AFWVNVKVNFDNVAMGYLALLQVATFKGWMD>I<MYAAVDSREVNMQPKWEDNVYMYLYFVIFI1402
SCN11ASWINQKVNFDNVGNAYLALLQVATFKGWMD>I<IYAAVDSTEKEQQPEFESNSLGYIYFVVFI1292
SCN1ARWKNVKVNFDNVGFGYLSLLQVATFKGWMD>I<MYAAVDSRNVELQPKYEESLYMYLYFVIFI1467
SCN2ARWKNVKVNFDNVGLGYLSLLQVATFKGWMD>I<MYAAVDSRNVELQPKYEDNLYMYLYFVIFI1457
SCN3ARWKNVKVNFDNVGAGYLALLQVATFKGWMD>I<MYAAVDSRDVKLQPVYEENLYMYLYFVIFI1452
SCN4ARWLNVKVNYDNVGLGYLSLLQVATFKGWMD>I<MYAAVDSREKEEQPQYEVNLYMYLYFVIFI1279
SCN5AYWTKVKVNFDNVGAGYLALLQVATFKGWMD>I<MYAAVDSRGYEEQPQWEYNLYMYIYFVIFI1454
SCN7ALWENAKMNFDNVGNGFLSLLQVATFNGWIT>I<MNSAIDSVAVNIQPHFEVNIYMYCYFINFI1177
SCN8ARWKNVKINFDNVGAGYLALLQVATFKGWMD>I<MYAAVDSRKPDEQPKYEDNIYMYIYFVIFI1448
SCN9ARWKNLKVNFDNVGLGYLSLLQVATFKGWTI>I<MYAAVDSVNVDKQPKYEYSLYMYIYFVVFI1430
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 1120 for CACNA1C.