Paralogue Annotation for CACNA1C residue 1485

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 1485
Reference Amino Acid: D - Aspartate
Protein Domain: TM domain 4


Paralogue Variants mapped to CACNA1C residue 1485

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN1AE1795KGeneralized epilepsy with febrile seizures plusMedium9 20600615
SCN5AE1781GLong QT syndromeMedium9 23174487

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CYFISFYMLCAFLIINLFVAVIMDNFDYLTR>D<WSI-LGPHHLDEFKRIWAEYDPEAKGRIKH1514
CACNA1AYFVSFIFLCSFLMLNLFVAVIMDNFEYLTR>D<SSI-LGPHHLDEYVRVWAEYDPAACGRIHY1849
CACNA1BYFVSFIFLCSFLMLNLFVAVIMDNFEYLTR>D<SSI-LGPHHLDEFIRVWAEYDPAACGRISY1747
CACNA1DYFISFYMLCAFLIINLFVAVIMDNFDYLTR>D<WSI-LGPHHLDEFKRIWSEYDPEAKGRIKH1522
CACNA1EYFVSFIFFCSFLMLNLFVAVIMDNFEYLTR>D<SSI-LGPHHLDEFVRVWAEYDRAACGRIHY1761
CACNA1FYFISFFMLCAFLIINLFVAVIMDNFDYLTR>D<WSI-LGPHHLDEFKRIWSEYDPGAKGRIKH1479
CACNA1GYFVSFVLTAQFVLVNVVIAVLMKHLEESNK>E<AKE---EAELEAELELEMKT-LSPQPHSPL1886
CACNA1HYFVTFVLVAQFVLVNVVVAVLMKHLEESNK>E<ARE---DAELDAEIELEMAQGPGSARRVDA1896
CACNA1IYFVSFVLTAQFVLINVVVAVLMKHLDDSNK>E<AQE---DAEMDAELELEMAHGLGPGPRLPT1766
CACNA1SYFISFYMLCAFLVINLFVAVIMDNFDYLTR>D<WSI-LGPHHLDEFKAIWAEYDPEAKGRIKH1419
SCN10AFFTTYIIISFLIMVNMYIAVILENFNVATE>E<STEPLSEDDFDMFYETWEKFDPEATQFITF1761
SCN11AYFVSYIIISFLIVVNMYIAVILENFNTATE>E<SEDPLGEDDFDIFYEVWEKFDPEATQFIKY1643
SCN1AFFVSYIIISFLVVVNMYIAVILENFSVATE>E<SAEPLSEDDFEMFYEVWEKFDPDATQFMEF1825
SCN2AFFVSYIIISFLVVVNMYIAVILENFSVATE>E<SAEPLSEDDFEMFYEVWEKFDPDATQFIEF1815
SCN3AFFVSYIIISFLVVVNMYIAVILENFSVATE>E<SAEPLSEDDFEMFYEVWEKFDPDATQFIEF1810
SCN4AFFCSYIIISFLIVVNMYIAIILENFNVATE>E<SSEPLGEDDFEMFYETWEKFDPDATQFIAY1637
SCN5AFFTTYIIISFLIVVNMYIAIILENFSVATE>E<STEPLSEDDFDMFYEIWEKFDPEATQFIEY1811
SCN7AYFVSYILISWLIIVNMYIVVVMEFLNIASK>K<KNKTLSEDDFRKFFQVWKRFDPDRTQYIDS1535
SCN8AFFVSYIIISFLIVVNMYIAIILENFSVATE>E<SADPLSEDDFETFYEIWEKFDPDATQFIEY1805
SCN9AYFVSYIIISFLVVVNMYIAVILENFSVATE>E<STEPLSEDDFEMFYEVWEKFDPDATQFIEF1788
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 1485 for CACNA1C.