Paralogue Annotation for CACNA1C residue 388

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 388
Reference Amino Acid: L - Leucine
Protein Domain: TM domain 1


Paralogue Variants mapped to CACNA1C residue 388

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN5AV396ABrugada syndromeMedium9 20129283, 24136861
SCN5AV396LBrugada syndromeMedium9 20129283, 24136861
SCN1AV406FDravet syndromeMedium9 19589774

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CQCITMEGWTDVLYWVNDAVGRDWPWIYFVT>L<IIIGSFFVLNLVLGVLSGEFSKEREKAKAR418
CACNA1AQCITMEGWTDLLYNSNDASGNTWNWLYFIP>L<IIIGSFFMLNLVLGVLSGEFAKERERVENR373
CACNA1BQCITMEGWTDILYNTNDAAGNTWNWLYFIP>L<IIIGSFFMLNLVLGVLSGEFAKERERVENR369
CACNA1DQCITMEGWTDVLYWVNDAIGWEWPWVYFVS>L<IILGSFFVLNLVLGVLSGEFSKEREKAKAR419
CACNA1EQCITMEGWTTVLYNTNDALGATWNWLYFIP>L<IIIGSFFVLNLVLGVLSGEFAKERERVENR364
CACNA1FQCVTMEGWTDVLYWMQDAMGYELPWVYFVS>L<VIFGSFFVLNLVLGVLSGEFSKEREKAKAR385
CACNA1GQVITLEGWVDIMYFVMDAHSF-YNFIYFIL>L<IIVGSFFMINLCLVVIATQFSETKQRESQL408
CACNA1HQVITLEGWVDIMYYVMDAHSF-YNFIYFIL>L<IIVGSFFMINLCLVVIATQFSETKQRESQL432
CACNA1IQVITLEGWVEIMYYVMDAHSF-YNFIYFIL>L<IIVGSFFMINLCLVVIATQFSETKQREHRL411
CACNA1SQCITMEGWTDVLYWVNDAIGNEWPWIYFVT>L<ILLGSFFILNLVLGVLSGEFTKEREKAKSR347
SCN10ARLMTQDSWERLYQQTLRTSGKIY-MIFFVL>V<IFLGSFYLVNLILAVVTMAYEEQNQATTDE410
SCN11ARLMTQDSWEKLYQQTLRTTGLYS-VFFFIV>V<IFLGSFYLINLTLAVVTMAYEEQNKNVAAE413
SCN1ARLMTQDFWENLYQLTLRAAGKTY-MIFFVL>V<IFLGSFYLINLILAVVAMAYEEQNQATLEE436
SCN2ARLMTQDFWENLYQLTLRAAGKTY-MIFFVL>V<IFLGSFYLINLILAVVAMAYEEQNQATLEE438
SCN3ARLMTQDYWENLYQLTLRAAGKTY-MIFFVL>V<IFLGSFYLVNLILAVVAMAYEEQNQATLEE437
SCN4ARLMTQDYWENLFQLTLRAAGKTY-MIFFVV>I<IFLGSFYLINLILAVVAMAYAEQNEATLAE460
SCN5ARLMTQDCWERLYQQTLRSAGKIY-MIFFML>V<IFLGSFYLVNLILAVVAMAYEEQNQATIAE426
SCN7ARLMAQDYPEVLYHQILYASGKVY-MIFFVV>V<SFLFSFYMASLFLGILAMAYEEEKQRVGEI407
SCN8ARLMTQDYWENLYQLTLRAAGKTY-MIFFVL>V<IFVGSFYLVNLILAVVAMAYEEQNQATLEE424
SCN9ARLMTQDYWENLYQQTLRAAGKTY-MIFFVV>V<IFLGSFYLINLILAVVAMAYEEQNQANIEE415
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 388 for CACNA1C.