Paralogue Annotation for CACNA1C residue 557

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 557
Reference Amino Acid: D - Aspartate
Protein Domain: TM domain 2


Paralogue Variants mapped to CACNA1C residue 557

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN5AQ750RLong QT syndromeMedium9 19716085

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CYWLVIFLVFLNTLTIASEHYNQPNWLTEVQ>D<TANKALLALFTAEMLLKMYSLGLQAYFVSL587
CACNA1AYWTVLSLVALNTLCVAIVHYNQPEWLSDFL>Y<YAEFIFLGLFMSEMFIKMYGLGTRPYFHSS550
CACNA1BYWVVLCVVALNTLCVAMVHYNQPRRLTTTL>Y<FAEFVFLGLFLTEMSLKMYGLGPRSYFRSS546
CACNA1DYWLVIVLVFLNTLTISSEHYNQPDWLTQIQ>D<IANKVLLALFTCEMLVKMYSLGLQAYFVSL606
CACNA1EYWIVLSLVALNTACVAIVHHNQPQWLTHLL>Y<YAEFLFLGLFLLEMSLKMYGMGPRLYFHSS539
CACNA1FYWAVLLLVFLNTLTIASEHHGQPVWLTQIQ>E<YANKVLLCLFTVEMLLKLYGLGPSAYVSSF592
CACNA1GGRGIMIAILVNTLSMGIEYHEQPEELTNAL>E<ISNIVFTSLFALEMLLKLLVYGPFGYIKNP806
CACNA1HSRGIMMAILVNTLSMGVEYHEQPEELTNAL>E<ISNIVFTSMFALEMLLKLLACGPLGYIRNP856
CACNA1INRGIMMAILVNTVSMGIEHHEQPEELTNIL>E<ICNVVFTSMFALEMILKLAAFGLFDYLRNP703
CACNA1SYWLVILIVALNTLSIASEHHNQPLWLTRLQ>D<IANRVLLSLFTTEMLMKMYGLGLRQYFMSI495
SCN10AELTITLCIVVNTIFMAMEHHGMSPTFEAML>Q<IGNIVFTIFFTAEMVFKIIAFDPYYYFQKK728
SCN11AELAITICIIINTVFLAMEHHKMEASFEKML>N<IGNLVFTSIFIAEMCLKIIALDPYHYFRRG640
SCN1ADLAITICIVLNTLFMAMEHYPMTDHFNNVL>T<VGNLVFTGIFTAEMFLKIIAMDPYYYFQEG831
SCN2ADLAITICIVLNTLFMAMEHYPMTEQFSSVL>S<VGNLVFTGIFTAEMFLKIIAMDPYYYFQEG822
SCN3ADLAITICIVLNTLFMAMEHYPMTEQFSSVL>T<VGNLVFTGIFTAEMVLKIIAMDPYYYFQEG823
SCN4ADLGITICIVLNTLFMAMEHYPMTEHFDNVL>T<VGNLVFTGIFTAEMVLKLIAMDPYEYFQQG641
SCN5ADLTITMCIVLNTLFMALEHYNMTSEFEEML>Q<VGNLVFTGIFTAEMTFKIIALDPYYYFQQG780
SCN7ADLFLIICIILNVCFLTLEHYPMSKQTNTLL>N<IGNLVFIGIFTAEMIFKIIAMHPYGYFQVG568
SCN8ADLAITICIVLNTLFMAMEHHPMTPQFEHVL>A<VGNLVFTGIFTAEMFLKLIAMDPYYYFQEG816
SCN9ADLAITICIVLNTLFMAMEHHPMTEEFKNVL>A<IGNLVFTGIFAAEMVLKLIAMDPYEYFQVG796
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 557 for CACNA1C.