Paralogue Annotation for CACNA1C residue 687

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 687
Reference Amino Acid: S - Serine
Protein Domain: TM domain 2


Paralogue Variants mapped to CACNA1C residue 687

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN1AW932XMyoclonic epilepsy of infancyMedium8 12754708, 24656210, 25525159
SCN1AW932CDravet syndrome C ?Medium8 21248271

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CMQLFGGKFNFD-E------------MQTRR>S<TFDNFPQSLLTVFQILTGEDWNSVMYDGIM717
CACNA1AMQLFGGQFNFD-E------------G-TPP>T<NFDTFPAAIMTVFQILTGEDWNEVMYDGIK679
CACNA1BMQLFGGQFNFQ-D------------E-TPT>T<NFDTFPAAILTVFQILTGEDWNAVMYHGIE675
CACNA1DMQLFGGKFNFD-E------------TQTKR>S<TFDNFPQALLTVFQILTGEDWNAVMYDGIM736
CACNA1EMQLFGGRFNFN-D------------G-TPS>A<NFDTFPAAIMTVFQILTGEDWNEVMYNGIR668
CACNA1FMQLFGGKFNFD-Q------------THTKR>S<TFDTFPQALLTVFQILTGEDWNVVMYDGIM722
CACNA1GMHLFGCKFASER---------DG-DTLPDR>K<NFDSLLWAIVTVFQILTQEDWNKVLYNGMA934
CACNA1HMHLFGCKFSLKTD--------TG-DTVPDR>K<NFDSLLWAIVTVFQILTQEDWNVVLYNGMA985
CACNA1IMHIFGCKFSLRTD--------TG-DTVPDR>K<NFDSLLWAIVTVFQILTQEDWNVVLYNGMA832
CACNA1SMQLFGGRYDFE-D------------TEVRR>S<NFDNFPQALISVFQVLTGEDWTSMMYNGIM625
SCN10AKQLLGENYRNN-RKN----I-SAPHEDWPR>W<HMHDFFHSFLIVFRILCGE-WIENMWACME859
SCN11AMQLFGRSFNSQ-KSPKLCNPTGPTVSCLRH>W<HMGDFWHSFLVVFRILCGE-WIENMWECMQ778
SCN1AMQLFGKSYKDC-VCK----I-AS-DCQLPR>W<HMNDFFHSFLIVFRVLCGE-WIETMWDCME961
SCN2AMQLFGKSYKEC-VCK----I-SN-DCELPR>W<HMHDFFHSFLIVFRVLCGE-WIETMWDCME952
SCN3AMQLFGKSYKEC-VCK----I-ND-DCTLPR>W<HMNDFFHSFLIVFRVLCGE-WIETMWDCME953
SCN4AMQLFGKSYKEC-VCK----I-AL-DCNLPR>W<HMHDFFHSFLIVFRILCGE-WIETMWDCME771
SCN5AMQLFGKNYSEL-RDS----D-SG---LLPR>W<HMMDFFHAFLIIFRILCGE-WIETMWDCME908
SCN7AMKLFGKNYEEF-VCH----I-DK-DCQLPR>W<HMHDFFHSFLNVFRILCGE-WVETLWDCME698
SCN8AMQLFGKSYKEC-VCK----I-NQ-DCELPR>W<HMHDFFHSFLIVFRVLCGE-WIETMWDCME946
SCN9AMQLFGKSYKEC-VCK----I-ND-DCTLPR>W<HMNDFFHSFLIVFRVLCGE-WIETMWDCME926
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 687 for CACNA1C.