Paralogue Annotation for KCNH2 residue 493

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 493
Reference Amino Acid: Y - Tyrosine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNH2 residue 493

No paralogue variants have been mapped to residue 493 for KCNH2.



KCNH2VDI-LINFRTTYVN-ANEEVVSHPGRIAVH>Y<FKGW-FLIDMVAAIPFDLLIFGSGSEE---519
KCNH1VDI-VLNFHTTFVG-PAGEVISDPKLIRMN>Y<LKTW-FVIDLLSCLPYDVINAFENVDEVSA320
KCNH3LDI-VLNFRTTFVS-KSGQVVFAPKSICLH>Y<VTTW-FLLDVIAALPFDLLHAF-KVN----326
KCNH4LDI-ILNFRTTYVS-QSGQVISAPRSIGLH>Y<LATW-FFIDLIAALPFDLLYIF-NIT----328
KCNH5VDI-VLNFHTTFVG-PGGEVISDPKLIRMN>Y<LKTW-FVIDLLSCLPYDIINAFENVDEG--315
KCNH6VDI-VINFRTTYVN-TNDEVVSHPRRIAVH>Y<FKGW-FLIDMVAAIPFDLLIFRTGSDE---367
KCNH7IDI-LINFRTTYVN-QNEEVVSDPAKIAIH>Y<FKGW-FLIDMVAAIPFDLLIFGSGSDE---518
KCNH8IDI-ILNFRTTYVS-KSGQVIFEARSICIH>Y<VTTW-FIIDLIAALPFDLLYAF-NVT----322
CNGA1IDM-FVRTRTGYLE--QGLLVKEELKLINK>Y<KSNLQFKLDVLSLIPTDLLYFKLGWNY---267
CNGA2ADL-FIRLRTGFLE--QGLLVKDTKKLRDN>Y<IHTLQFKLDVASIIPTDLIYFAVDIHS---242
CNGA3LDV-LVRARTGFLE--QGLMVSDTNRLWQH>Y<KTTTQFKLDVLSLVPTDLAYLKVGTNY---270
CNGA4LDM-VVRFHTGFLE--QGILVVDKGRISSR>Y<VRTWSFFLDLASLMPTDVVYVRLGPHT---136
CNGB1LDITVFQTRLQFVR--GGDIITDKKDMRNN>Y<LKSRRFKMDLLSLLPLDFLYLKVGVN----758
CNGB3YDMLFIQPRLQFVR--GGDIIVDSNELRKH>Y<RTSTKFQLDVASIIPFDICYLFFGFN----320
HCN1LDL-IMNFRTGTVNEDSSEIILDPKVIKMN>Y<LKSW-FVVDFISSIPVDYIFLIVEK--GMD244
HCN2MDL-VLNFRTGIVIEDNTEIILDPEKIKKK>Y<LRTW-FVVDFVSSIPVDYIFLIVEK--GID313
HCN3LDL-VLNFRTGIVVEEGAEILLAPRAIRTR>Y<LRTW-FLVDLISSIPVDYIFLVVELEPRLD197
HCN4IDL-VLNFRTGIVVEDNTEIILDPQRIKMK>Y<LKSW-FMVDFISSIPVDYIFLIVET--RID364
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.Y493Cc.1478A>G Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Long QT syndrome in neonates: conduction disorders associated with HERG mutations and sinus bradycardia with KCNQ1 mutations. J Am Coll Cardiol. 2004 43(5):826-30. 14998624
Inherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
p.Y493Fc.1478A>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Characterization of novel KCNH2 mutations in type 2 long QT syndrome manifesting as seizures. Can J Cardiol. 2009 25(8):455-62. 19668779
p.Y493Sc.1478A>C Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
p.Y493Hc.1477T>C Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Results of genetic testing in 855 consecutive unrelated patients referred for long QT syndrome in a clinical laboratory. Genet Test Mol Biomarkers. 2013 17(7):553-61. doi: 10.1089/gtmb.2012.0118. 23631430