Paralogue | Variant | Associated Disease | Mapping Quality | Consensus | Pubmed |
---|---|---|---|---|---|
KCNJ11 | A174G | Diabetes, transient neonatal | Medium | 9 | 17635943 |
KCNJ11 | A174V | Hyperinsulinism of infancy | Medium | 9 | 23652837 |
To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in KCNJ2.
KCNJ2 | IAVFMVVFQSIVGCIIDAFIIGAVMAKMAK>P<KKRNETLVFSHNAVIAMRDGKLCLMWRVGN | 216 |
KCNJ1 | TAIFLLIFQSILGVIINSFMCGAILAKISR>P<KKRAKTITFSKNAVISKRGGKLCLLIRVAN | 215 |
KCNJ3 | EGIILFLFQSILGSIVDAFLIGCMFIKMSQ>P<KKRAETLMFSEHAVISMRDGKLTLMFRVGN | 217 |
KCNJ4 | LAVIAVVVQSIVGCVIDSFMIGTIMAKMAR>P<KKRAQTLLFSHHAVISVRDGKLCLMWRVGN | 208 |
KCNJ5 | EGIILLLVQAILGSIVNAFMVGCMFVKISQ>P<KKRAETLMFSNNAVISMRDEKLCLMFRVGD | 223 |
KCNJ6 | EGIILLLIQSVLGSIVNAFMVGCMFVKISQ>P<KKRAETLVFSTHAVISMRDGKLCLMFRVGD | 226 |
KCNJ8 | LAITVLILQNIVGLIINAVMLGCIFMKTAQ>A<HRRAETLIFSRHAVIAVRNGKLCFMFRVGD | 214 |
KCNJ9 | EGIVLLLLQAILGSMVNAFMVGCMFVKISQ>P<NKRAATLVFSSHAVVSLRDGRLCLMFRVGD | 194 |
KCNJ10 | LAIVLLIAQLVLTTILEIFITGTFLAKIAR>P<KKRAETIRFSQHAVVASHNGKPCLMIRVAN | 202 |
KCNJ11 | LAILILIVQNIVGLMINAIMLGCIFMKTAQ>A<HRRAETLIFSKHAVIALRHGRLCFMLRVGD | 204 |
KCNJ12 | VAVFMVVAQSIVGCIIDSFMIGAIMAKMAR>P<KKRAQTLLFSHNAVVALRDGKLCLMWRVGN | 217 |
KCNJ13 | SAIALLAIQMLLGLMLEAFITGAFVAKIAR>P<KNRAFSIRFTDTAVVAHMDGKPNLIFQVAN | 193 |
KCNJ14 | AAVAAVVLQCIAGCVLDAFVVGAVMAKMAK>P<KKRNETLVFSENAVVALRDHRLCLMWRVGN | 221 |
KCNJ15 | HAIFLLVAQLVITTLIEIFITGTFLAKIAR>P<KKRAETIKFSHCAVITKQNGKLCLVIQVAN | 201 |
KCNJ16 | VAVLMVILQSILSCIINTFIIGAALAKMAT>A<RKRAQTIRFSYFALIGMRDGKLCLMWRIGD | 205 |
cons | > < |
Protein | CDS | Disease Classification | Disease | dbSNP links | Effect Prediction |
---|---|---|---|---|---|
p.P186L | c.557C>T | Inherited Arrhythmia | LQTS | rs104894581 | SIFT: deleterious Polyphen: probably damaging |
Reports | Inherited Arrhythmia | LQTS | Functional and clinical characterization of KCNJ2 mutations associated with LQT7 (Andersen syndrome). J Clin Invest. 2002 110(3):381-8. 12163457 | ||
Inherited Arrhythmia | LQTS | Altered stress stimulation of inward rectifier potassium channels in Andersen-Tawil syndrome. FASEB J. 2012 26(2):513-22. 22002906 |