Paralogue Annotation for KCNQ1 residue 153

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 153
Reference Amino Acid: T - Threonine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNQ1 residue 153

No paralogue variants have been mapped to residue 153 for KCNQ1.



KCNQ1---------------------------ALA>T<GT-LF-WMEIVLVVFFGTEYVVRLWSAGCR181
KCNQ2---------------------------KSS>E<GA-LY-ILEIVTIVVFGVEYFVRIWAAGCC151
KCNQ3---------------------------TVS>G<DW-LL-LLETFAIFIFGAEFALRIWAAGCC181
KCNQ4---------------------------ELA>N<EC-LL-ILEFVMIVVFGLEYIVRVWSAGCC157
KCNQ5---------------------------KLA>S<SC-LL-ILEFVMIVVFGLEFIIRIWSAGCC185
KCNA1-TV-H-RI----D------NTTVIYNSNIF>T<DP-FF-IVETLCIIWFSFELVVR-------239
KCNA10-VR-DPN-----L-----NMSKTVLSQTMF>T<DP-FF-MVESTCIVWFTFELVLR-------289
KCNA2-TF-H-TY----S-----NSTIGYQQSTSF>T<DP-FF-IVETLCIIWFSFEFLVR-------240
KCNA3-SF-E-AAG---N-----STSGSRAGASSF>S<DP-FF-VVETLCIIWFSFELLVR-------313
KCNA4-GH-G-GLLNDTS-----APHLENSGHTIF>N<DP-FF-IVETVCIVWFSFEFVVR-------389
KCNA5N--GS-GVMAPPS-----GPTVAPLLPRTL>A<DP-FF-IVETTCVIWFTFELLVR-------342
KCNA6SYTFH-HGITPGEMGTGGSSSLSTLGGSFF>T<DP-FF-LVETLCIVWFTFELLVR-------281
KCNA7-PF-P-APL-NGS-----SQMPGNPPRLPF>N<DP-FF-VVETLCICWFSFELLVR-------227
KCNB1----------------------------ST>D<NPQLA-HVEAVCIAWFTMEYLLR-------247
KCNB2----------------------------LN>D<NRQLA-HVEAVCIAWFTMEYLLR-------251
KCNC1----N-V-----R-----NGTQVRYYREAE>T<EA-FLTYIEGVCVVWFTFEFLMR-------263
KCNC2----P-V-----I-----NGTSVVLQYEIE>T<DP-ALTYVEGVCVVWFTFEFLVR-------300
KCNC3-SP-I-P-----G-----APPENITNVEVE>T<EP-FLTYVEGVCVVWFTFEFLMR-------366
KCNC4----R-V-----G-----NITSVHFRREVE>T<EP-ILTYIEGVCVLWFTLEFLVR-------299
KCND1----------------------EQPCGERF>P<QA-FF-CMDTACVLIFTGEYLLR-------249
KCND2----------------------ELPCGERY>A<VA-FF-CLDTACVMIFTVEYLLR-------247
KCND3----------------------ELPCGERY>S<VA-FF-CLDTACVMIFTVEYLLR-------244
KCNF1----------------------------RV>E<HPTLE-NVETACIGWFTLEYLLR-------240
KCNG1------C--------------------SQM>C<HN-VF-IVESVCVGWFSLEFLLR-------286
KCNG2------C--------------------SPK>C<RS-LF-VLETVCVAWFSFEFLLR-------236
KCNG3------S-L----------DDRSRYSAGPG>R<EP-SG-IIEAICIGWFTAECIVR-------239
KCNG4------C--------------------SRK>C<YY-IF-IVETICVAWFSLEFCLR-------280
KCNS1------VA----------AVAAGRSPEGVR>D<DPVLR-RLEYFCIAWFSFEVSSR-------290
KCNS2----------------------------PG>E<DPRFE-IVEHFGIAWFTFELVAR-------245
KCNS3-----------------------------V>D<DPVLE-GVEIACIAWFTGELAVR-------240
KCNV1----------------------------WL>D<LQLLE-ILEYVCISWFTGEFVLR-------260
KCNV2------G--------------------GPD>L<RPILE-HVEMLCMGFFTLEYLLR-------320
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.T153Mc.458C>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS Actionable, pathogenic incidental findings in 1,000 participants' exomes. Am J Hum Genet. 2013 93(4):631-40. doi: 10.1016/j.ajhg.2013.08.006. 24055113
Unknown Actionable exomic incidental findings in 6503 participants: challenges of variant classification. Genome Res. 2015 25(3):305-15. doi: 10.1101/gr.183483.114. 25637381
Unknown Novel genotype-phenotype associations demonstrated by high-throughput sequencing in patients with hypertrophic cardiomyopathy. Heart. 2015 101(4):294-301. doi: 10.1136/heartjnl-2014-306387. 25351510
Inherited ArrhythmiaLQTS Identification of Medically Actionable Secondary Findings in the 1000 Genomes. PLoS One. 2015 10(9):e0135193. doi: 10.1371/journal.pone.0135193. 26332594