Paralogue Annotation for KCNQ1 residue 172

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 172
Reference Amino Acid: V - Valine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNQ1 residue 172

No paralogue variants have been mapped to residue 172 for KCNQ1.



KCNQ1------ALATGT-LF-WMEIVLVVFFGTEY>V<VRLWSAGCRSKYVGLWGRLRFARKPISIID202
KCNQ2------KSSEGA-LY-ILEIVTIVVFGVEY>F<VRIWAAGCCCRYRGWRGRLKFARKPFCVID172
KCNQ3------TVSGDW-LL-LLETFAIFIFGAEF>A<LRIWAAGCCCRYKGWRGRLKFARKPLCMLD202
KCNQ4------ELANEC-LL-ILEFVMIVVFGLEY>I<VRVWSAGCCCRYRGWQGRFRFARKPFCVID178
KCNQ5------KLASSC-LL-ILEFVMIVVFGLEF>I<IRIWSAGCCCRYRGWQGRLRFARKPFCVID206
KCNA1TVIYNSNIFTDP-FF-IVETLCIIWFSFEL>V<VR---------FFACPSKTDFFKNIMNFID258
KCNA10KTVLSQTMFTDP-FF-MVESTCIVWFTFEL>V<LR---------FVVCPSKTDFFRNIMNIID308
KCNA2IGYQQSTSFTDP-FF-IVETLCIIWFSFEF>L<VR---------FFACPSKAGFFTNIMNIID259
KCNA3GSRAGASSFSDP-FF-VVETLCIIWFSFEL>L<VR---------FFACPSKATFSRNIMNLID332
KCNA4LENSGHTIFNDP-FF-IVETVCIVWFSFEF>V<VR---------CFACPSQALFFKNIMNIID408
KCNA5VAPLLPRTLADP-FF-IVETTCVIWFTFEL>L<VR---------FFACPSKAGFSRNIMNIID361
KCNA6LSTLGGSFFTDP-FF-LVETLCIVWFTFEL>L<VR---------FSACPSKPAFFRNIMNIID300
KCNA7PGNPPRLPFNDP-FF-VVETLCICWFSFEL>L<VR---------LLVCPSKAIFFKNVMNLID246
KCNB1-------STDNPQLA-HVEAVCIAWFTMEY>L<LR---------FLSSPKKWKFFKGPLNAID266
KCNB2-------LNDNRQLA-HVEAVCIAWFTMEY>L<LR---------FLSSPNKWKFFKGPLNVID270
KCNC1QVRYYREAETEA-FLTYIEGVCVVWFTFEF>L<MR---------VIFCPNKVEFIKNSLNIID282
KCNC2SVVLQYEIETDP-ALTYVEGVCVVWFTFEF>L<VR---------IVFSPNKLEFIKNLLNIID319
KCNC3ENITNVEVETEP-FLTYVEGVCVVWFTFEF>L<MR---------ITFCPDKVEFLKSSLNIID385
KCNC4SVHFRREVETEP-ILTYIEGVCVLWFTLEF>L<VR---------IVCCPDTLDFVKNLLNIID318
KCND1-EQPCGERFPQA-FF-CMDTACVLIFTGEY>L<LR---------LFAAPSRCRFLRSVMSLID268
KCND2-ELPCGERYAVA-FF-CLDTACVMIFTVEY>L<LR---------LAAAPSRYRFVRSVMSIID266
KCND3-ELPCGERYSVA-FF-CLDTACVMIFTVEY>L<LR---------LFAAPSRYRFIRSVMSIID263
KCNF1-------RVEHPTLE-NVETACIGWFTLEY>L<LR---------LFSSPNKLHFALSFMNIVD259
KCNG1------SQMCHN-VF-IVESVCVGWFSLEF>L<LR---------LIQAPSKFAFLRSPLTLID305
KCNG2------SPKCRS-LF-VLETVCVAWFSFEF>L<LR---------SLQAESKCAFLRAPLNIID255
KCNG3RSRYSAGPGREP-SG-IIEAICIGWFTAEC>I<VR---------FIVSKNKCEFVKRPLNIID258
KCNG4------SRKCYY-IF-IVETICVAWFSLEF>C<LR---------FVQAQDKCQFFQGPLNIID299
KCNS1AGRSPEGVRDDPVLR-RLEYFCIAWFSFEV>S<SR---------LLLAPSTRNFFCHPLNLID309
KCNS2-------PGEDPRFE-IVEHFGIAWFTFEL>V<AR---------FAVAPDFLKFFKNALNLID264
KCNS3--------VDDPVLE-GVEIACIAWFTGEL>A<VR---------LAAAPCQKKFWKNPLNIID259
KCNV1-------WLDLQLLE-ILEYVCISWFTGEF>V<LR---------FLCVRDRCRFLRKVPNIID279
KCNV2------GPDLRPILE-HVEMLCMGFFTLEY>L<LR---------LASTPDLRRFARSALNLVD339
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.V172Mc.514G>A Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Location of mutation in the KCNQ1 and phenotypic presentation of long QT syndrome. J Cardiovasc Electrophysiol. 2003 14(11):1149-53. 14678125
Inherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS High diagnostic yield of clinical exome sequencing in Middle Eastern patients with Mendelian disorders. Hum Genet. 2015 134(9):967-80. doi: 10.1007/s00439-015-1575-0. 26077850
p.V172Ec.515T>A Putative BenignSIFT:
Polyphen: