Paralogue Annotation for KCNQ1 residue 209

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 209
Reference Amino Acid: S - Serine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNQ1 residue 209

No paralogue variants have been mapped to residue 209 for KCNQ1.



KCNQ1GCRSKYVGLWGRLRFARKPISIIDLIVVVA>S<MVVLCVG----------------SKGQVFA223
KCNQ2GCCCRYRGWRGRLKFARKPFCVIDIMVLIA>S<IAVLAAG----------------SQGNVFA193
KCNQ3GCCCRYKGWRGRLKFARKPLCMLDIFVLIA>S<VPVVAVG----------------NQGNVLA223
KCNQ4GCCCRYRGWQGRFRFARKPFCVIDFIVFVA>S<VAVIAAG----------------TQGNIFA199
KCNQ5GCCCRYRGWQGRLRFARKPFCVIDTIVLIA>S<IAVVSAK----------------TQGNIFA227
KCNA1-----FFACPSKTDFFKNIMNFIDIVAIIP>Y<FITLGTEIAEQEG-------N-QKGEQATS287
KCNA10-----FVVCPSKTDFFRNIMNIIDIISIIP>Y<FATLITELVQETEP---------SAQQNMS336
KCNA2-----FFACPSKAGFFTNIMNIIDIVAIIP>Y<FITLGTELAEKPE-------DAQQGQQAMS289
KCNA3-----FFACPSKATFSRNIMNLIDIVAIIP>Y<FITLGTELAERQ----------GNGQQAMS359
KCNA4-----CFACPSQALFFKNIMNIIDIVSILP>Y<FITLGTDLAQQQGG------GNGQQQQAMS439
KCNA5-----FFACPSKAGFSRNIMNIIDVVAIFP>Y<FITLGTELAEQQ---PGGGGGGQNGQQAMS395
KCNA6-----FSACPSKPAFFRNIMNIIDLVAIFP>Y<FITLGTELVQQQEQQPASGGGGQNGQQAMS337
KCNA7-----LLVCPSKAIFFKNVMNLIDFVAILP>Y<FVALGTELARQR----------GVGQQAMS273
KCNB1-----FLSSPKKWKFFKGPLNAIDLLAILP>Y<YVTIFLTES---N--------KSVLQFQNV292
KCNB2-----FLSSPNKWKFFKGPLNVIDLLAILP>Y<YVTIFLTES---N--------KSVLQFQNV296
KCNC1-----VIFCPNKVEFIKNSLNIIDFVAILP>F<YLEVGLSG-------------LSSKAAKDV306
KCNC2-----IVFSPNKLEFIKNLLNIIDFVAILP>F<YLEVGLSG-------------LSSKAAKDV343
KCNC3-----ITFCPDKVEFLKSSLNIIDCVAILP>F<YLEVGLSG-------------LSSKAAKDV409
KCNC4-----IVCCPDTLDFVKNLLNIIDFVAILP>F<YLEVGLSG-------------LSSKAARDV342
KCND1-----LFAAPSRCRFLRSVMSLIDVVAILP>Y<YIGLLVP------------------KNDDV287
KCND2-----LAAAPSRYRFVRSVMSIIDVVAILP>Y<YIGLVMT------------------DNEDV285
KCND3-----LFAAPSRYRFIRSVMSIIDVVAIMP>Y<YIGLVMT------------------NNEDV282
KCNF1-----LFSSPNKLHFALSFMNIVDVLAILP>F<YVSLTLTHL-----------GARMMELTNV285
KCNG1-----LIQAPSKFAFLRSPLTLIDLVAILP>Y<YITLLVDGAAAGRR----KPGAGNSYLDKV338
KCNG2-----SLQAESKCAFLRAPLNIIDILALLP>F<YVSLLLGL-----A----AGPGGTKLLERA283
KCNG3-----FIVSKNKCEFVKRPLNIIDLLAITP>Y<YISVLMTV-----------FTGENSQLQRA284
KCNG4-----FVQAQDKCQFFQGPLNIIDILAISP>Y<YVSLAVSEEPPEDG----ERPSGSSYLEKV332
KCNS1-----LLLAPSTRNFFCHPLNLIDIVSVLP>F<YLTLLAGVALG-D--------QGGKEFGHL337
KCNS2-----FAVAPDFLKFFKNALNLIDLMSIVP>F<YITLVVNLV---V--------ESTPTLANL290
KCNS3-----LAAAPCQKKFWKNPLNIIDFVSIIP>F<YATLAVDTK---E--------EESEDIENM285
KCNV1-----FLCVRDRCRFLRKVPNIIDLLAILP>F<YITLLVESLSG-S--------QTTQELENV307
KCNV2-----LASTPDLRRFARSALNLVDLVAILP>L<YLQLLLECFTGEGH----QRGQTVGSVGKV372
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.S209Fc.626C>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Genetic testing in the long QT syndrome: development and validation of an efficient approach to genotyping in clinical practice. JAMA. 2005 294(23):2975-80. 16414944
Inherited ArrhythmiaLQTS Mechanistic basis for LQT1 caused by S3 mutations in the KCNQ1 subunit of IKs. J Gen Physiol. 2010 135(5):433-48. 20421371
Inherited ArrhythmiaLQTS Microscopic mechanisms for long QT syndrome type 1 revealed by single-channel analysis of I(Ks) with S3 domain mutations in KCNQ1. Heart Rhythm. 2015 12(2):386-94. doi: 10.1016/j.hrthm.2014.10.029. 25444851
Inherited ArrhythmiaLQTS RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease. Science. 2015 347(6218):1254806. doi: 10.1126/science.1254806. 25525159
p.S209Pc.625T>C Inherited ArrhythmiaAFSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaAF Mutation in the S3 segment of KCNQ1 results in familial lone atrial fibrillation. Heart Rhythm. 2009 6(8):1146-53. 19632626