Paralogue Annotation for KCNQ1 residue 59

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 59
Reference Amino Acid: P - Proline
Protein Domain: N-terminus


Paralogue Variants mapped to KCNQ1 residue 59

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
KCNV2F158CCone dystrophy with supernormal rod ERGMedium9 17896311

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in KCNQ1.



KCNQ1---------------A--GGALYAPIAPGA>P<GP--------APPASPAAPAAPPVASDL--79
KCNQ2---------------------------A-P>K<---------------RGSILS---------55
KCNQ3------------------------------>-<DEG-----QR---R----TPQ---------83
KCNQ4-------------------------RRLGL>L<GSP-----L------PPGAPLP--------59
KCNQ5-------------------------ATLGG>G<GGG-----LRESRRGKQGARMS--------88
KCNA1-----KR-M---RYFDPLRNEYFFDRNRPS>F<DAILYYYQSGGRLRRPVNVPLDMFSEEIKF119
KCNA10-----KR-M---QFFDSMRNEYFFDRNRPS>F<DGILYYYQSGGKIRRPANVPIDIFADEISF168
KCNA2-----KR-M---RYFDPLRNEYFFDRNRPS>F<DAILYYYQSGGRLRRPVNVPLDIFSEEIRF115
KCNA3-----RR-M---RYFDPLRNEYFFDRNRPS>F<DAILYYYQSGGRIRRPVNVPIDIFSEEIRF186
KCNA4-----KR-T---QYFDPLRNEYFFDRNRPS>F<DAILYYYQSGGRLKRPVNVPFDIFTEEVKF258
KCNA5-----KR-L---RYFDPLRNEYFFDRNRPS>F<DGILYYYQSGGRLRRPVNVSLDVFADEIRF202
KCNA6-----RR-V---RFFDPLRNEYFFDRNRPS>F<DAILYYYQSGGRLRRPVNVPLDIFLEEIRF123
KCNA7-----RR-G---RFYDDARREYFFDRHRPS>F<DAVLYYYQSGGRLRRPAHVPLDVFLEEVAF95
KCNB1-----SL-LEVCDDYSLDDNEYFFDRHPGA>F<TSILNFYRT-GRLHMMEEMCALSFSQELDY121
KCNB2-----SL-LEVCDDYNLNENEYFFDRHPGA>F<TSILNFYRT-GKLHMMEEMCALSFGQELDY125
KCNC1--------S--HFDYDPRADEFFFDRHPGV>F<AHILNYYRT-GKLHCPADVCGPLYEEELAF93
KCNC2-----RGGR--ASDHPGGGREFFFDRHPGV>F<AYVLNYYRT-GKLHCPADVCGPLFEEELAF140
KCNC3--------A--RFDYDPGADEFFFDRHPGV>F<AYVLNYYRT-GKLHCPADVCGPLFEEELGF173
KCNC4-------GS--SGSSGGGGCEFFFDRHPGV>F<AYVLNYYRT-GKLHCPADVCGPLFEEELTF132
KCND1-----KE-F----FYDADSGEYFFDRDPDM>F<RHVLNFYRT-GRLHCPRQECIQAFDEELAF120
KCND2-----RD-F----FYHPETQQYFFDRDPDI>F<RHILNFYRT-GKLHYPRHECISAYDEELAF121
KCND3-----KE-F----FFNEDTKEYFFDRDPEV>F<RCVLNFYRT-GKLHYPRYECISAYDDELAF120
KCNF1-----TI-FSLCDDYDPGKREFYFDRDPDA>F<KCVIEVYYF-GEVHMKKGICPICFKNEMDF115
KCNG1-----DI-LNVCDDYDVTCNEFFFDRNPGA>F<GTILTFLRA-GKLRLLREMCALSFQEELLY153
KCNG2-----DL-LRVCDDYDVSRDEFFFDRSPCA>F<RAIVALLRA-GKLRLLRGPCALAFRDELAY107
KCNG3-----DV-LEVCDDYDRERNEYFFDRHSEA>F<GFILLYVRGHGKLRFAPRMCELSFYNEMIY100
KCNG4-----EI-VQLCDDYDEDSQEFFFDRSPSA>F<GVIVSFLAA-GKLVLLQEMCALSFQEELAY149
KCNS1-----QA-RRLCDDYDEAAREFYFDRHPGF>F<LSLLHFYRT-GHLHVLDELCVFAFGQEADY140
KCNS2-----AI-LELCDDYDDVQREFYFDRNPEL>F<PYVLHFYHT-GKLHVMAELCVFSFSQEIEY107
KCNS3-----AI-LELCDDYSVADKEYYFDRNPSL>F<RYVLNFYYT-GKLHVMEELCVFSFCQEIEY105
KCNV1LAAVPSP-LELCDDANPVDNEYFFDRSSQA>F<RYVLHYYRT-GRLHVMEQLCALSFLQEIQY139
KCNV2-----RQ-LSLCDDYEEQTDEYFFDRDPAV>F<QLVYNFYLS-GVLLVLDGLCPRRFLEELGY187
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

There are currently no reported variants at residue 59 for KCNQ1.