Paralogue Annotation for KCNQ1 residue 643

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 643
Reference Amino Acid: G - Glycine
Protein Domain: C-terminus


Paralogue Variants mapped to KCNQ1 residue 643

No paralogue variants have been mapped to residue 643 for KCNQ1.



KCNQ1---TPGSGGPPREGG--------AHITQPC>G<SGGS--------------------------647
KCNQ2PEPAPPYHSPEDSREH---VDRHGCIVKIV>R<SSSSTGQ------------------K----699
KCNQ3YYPTKGTSSPAEAEK--KEDNRYSDLKTII>C<NYSETGPPEPP-------------------696
KCNQ4PDITSDYHSPVDHEDISVSAQTL-SISRSV>S<TNM---------------------------694
KCNQ5CEQTSDYQSPVDSKDLSGSAQNSGCLSRST>S<ANISRGLQFILTPNEFSAQTFYALSP----707
KCNA1------------------------------>-<------------------------------
KCNA10------------------------------>-<------------------------------
KCNA2------------------------------>-<------------------------------
KCNA3------------------------------>-<------------------------------
KCNA4------------------------------>-<------------------------------
KCNA5------------------------------>-<------------------------------
KCNA6------------------------------>-<------------------------------
KCNA7------------------------------>-<------------------------------
KCNB1------------------TLLDK------->-<----------AVLSPESSIYTTASAKTPPR736
KCNB2------------------SQGDR------->-<----------PLLGTEVSAPCQGPSKGLSP786
KCNC1------------------------------>-<------------------------------
KCNC2------------------------------>-<------------------------------
KCNC3------------------------------>-<------------------------------
KCNC4------------------------------>-<------------------------------
KCND1------------------------------>-<------------------------------
KCND2------------------------------>-<------------------------------
KCND3------------------------------>-<------------------------------
KCNF1------------------------------>-<------------------------------
KCNG1------------------------------>-<------------------------------
KCNG2------------------------------>-<------------------------------
KCNG3------------------------------>-<------------------------------
KCNG4------------------------------>-<------------------------------
KCNS1------------------------------>-<------------------------------
KCNS2------------------------------>-<------------------------------
KCNS3------------------------------>-<------------------------------
KCNV1------------------------------>-<------------------------------
KCNV2------------------------------>-<------------------------------
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.G643Sc.1927G>A ConflictSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Genomic organization and mutational analysis of KVLQT1, a gene responsible for familial long QT syndrome. Hum Genet. 1998 103(3):290-4. 9799083
Putative Benign Twenty single nucleotide polymorphisms (SNPs) and their allelic frequencies in four genes that are responsible for familial long QT syndrome in the Japanese population. J Hum Genet. 2000 45(3):182-3. 10807545
Inherited ArrhythmiaLQTS Evidence for a single nucleotide polymorphism in the KCNQ1 potassium channel that underlies susceptibility to life-threatening arrhythmias. J Cardiovasc Electrophysiol. 2001 12(11):1223-9. 11761407
Benign Ethnic differences in cardiac potassium channel variants: implications for genetic susceptibility to sudden cardiac death and genetic testing for congenital long QT syndrome. Mayo Clin Proc. 2003 78(12):1479-87. 14661677
Inherited ArrhythmiaLQTS Additional gene variants reduce effectiveness of beta-blockers in the LQT1 form of long QT syndrome. J Cardiovasc Electrophysiol. 2004 15(2):190-9. 15028050
Putative Benign Compound heterozygosity for mutations Asp611-->Tyr in KCNQ1 and Asp609-->Gly in KCNH2 associated with severe long QT syndrome. Clin Sci (Lond). 2005 108(2):143-50. 15500450
Inherited ArrhythmiaJLNS [Relationship between congenital long QT syndrome and Brugada syndrome gene mutation]. Zhongguo Yi Xue Ke Xue Yuan Xue Bao. 2005 27(3):289-94. 16038262
Inherited ArrhythmiaLQTS Genetic polymorphisms in KCNQ1, HERG, KCNE1 and KCNE2 genes in the Chinese, Malay and Indian populations of Singapore. Br J Clin Pharmacol. 2006 61(3):301-8. 16487223
Inherited ArrhythmiaAF The single nucleotide polymorphisms of I(Ks) potassium channel genes and their association with atrial fibrillation in a Chinese population. Cardiology. 2007 108(2):97-103. 17016049
Other Cardiac Phenotype Single nucleotide polymorphisms and haplotype of four genes encoding cardiac ion channels in Chinese and their association with arrhythmia. Ann Noninvasive Electrocardiol. 2008 13(2):180-90. 18426444
Benign Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300