Paralogue Annotation for SCN5A residue 1

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1
Reference Amino Acid: M - Methionine
Protein Domain: N-terminus


Paralogue Variants mapped to SCN5A residue 1

No paralogue variants have been mapped to residue 1 for SCN5A.



SCN5A---->M<AN-F-L-------------LPRGTSSFRRF16
SCN1A---M>E<QT-V-L-------------VPPGPDSFNFF17
SCN2A---M>A<QS-V-L-------------VPPGPDSFRFF17
SCN3A---M>A<QA-L-L-------------VPPGPESFRLF17
SCN4AMARP>S<LC-T-L-------------VPLGPECLRPF20
SCN7A---->-<---M-L-------------ASPEPKGLVPF13
SCN8A---M>A<AR-L-L-------------APPGPDSFKPF17
SCN9A---->-<MA-M-L-------------PPPGPQSFVHF15
SCN10A---->M<EF-P-I-------------GSLETNNFRRF16
SCN11A-MDD>R<CY-P-V-------------IFPDERNFRPF19
CACNA1AMARF>-<----GD----EM-PARYGG-----------14
CACNA1BMVRF>-<----GD----EL-GGRYGG-----------14
CACNA1CMVNE>N<TR--MYIPEENHQGSNYGS-----------22
CACNA1DMMMM>-<----MMMKKMQHQRQQQAD--------H--20
CACNA1EMARF>-<----GE----AV-VARPGS-----------14
CACNA1FMSES>-<----E----GG----KDTT-----------11
CACNA1GMDEE>-<ED--GA-------------GAEESGQP-R-17
CACNA1HMTEG>-<ARAADE--V-RV-P--LGAPPPGPAALVGA28
CACNA1IMAE->-<----SA-------------SPPSSSAAAPA16
CACNA1SMEP->-<------------------------------3
cons    > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.M1Ic.3G>A Inherited ArrhythmiaBrSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaBrS An international compendium of mutations in the SCN5A-encoded cardiac sodium channel in patients referred for Brugada syndrome genetic testing. Heart Rhythm. 2010 7(1):33-46. 20129283