Paralogue Annotation for SCN5A residue 15

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 15
Reference Amino Acid: R - Arginine
Protein Domain: N-terminus


Paralogue Variants mapped to SCN5A residue 15

No paralogue variants have been mapped to residue 15 for SCN5A.



SCN5A-MAN-F-L-------------LPRGTSSFR>R<FTRESLAAIEKRMAEK-QARGSTTLQESRE44
SCN1AMEQT-V-L-------------VPPGPDSFN>F<FTRESLAAIERRIAEE-KAKNPKPD----K41
SCN2AMAQS-V-L-------------VPPGPDSFR>F<FTRESLAAIEQRIAEE-KAKRPKQE----R41
SCN3AMAQA-L-L-------------VPPGPESFR>L<FTRESLAAIEKRAAEE-KAKKPKKE----Q41
SCN4APSLC-T-L-------------VPLGPECLR>P<FTRESLAAIEQRAVEE-EARLQRNK----Q44
SCN7A-----M-L-------------ASPEPKGLV>P<FTKESFELIKQHIAKT--------H----N30
SCN8AMAAR-L-L-------------APPGPDSFK>P<FTPESLANIERRIAES-KLKKPPKADGSHR45
SCN9A--MA-M-L-------------PPPGPQSFV>H<FTKQSLALIEQRIAER-KSKEPKEE----K39
SCN10A-MEF-P-I-------------GSLETNNFR>R<FTPESLVEIEKQIAAKQGT-KKARE-KHRE43
SCN11ADRCY-P-V-------------IFPDERNFR>P<FTSDSLAAIEKRIAIQ-KEKKKSK-----D42
CACNA1AF-----GD----EM-PARYGG--------->-<--GGSGAAAGV-------------VVGSG-28
CACNA1BF-----GD----EL-GGRYGG--------->-<--PGGGERA-----------------RGG-24
CACNA1CENTR--MYIPEENHQGSNYGS--------->-<--PR-PAHANMN--------A-NAAAGLA-39
CACNA1DM-----MMMKKMQHQRQQQAD--------H>-<-ANE-ANYARGT--------R-LPLSGEG-38
CACNA1EF-----GE----AV-VARPGS--------->-<-----GDGD----------------SD-Q-21
CACNA1FS-----E----GG----KDTT--------->-<--PE-PSPAN--------------GAGPG-23
CACNA1GE-ED--GA-------------GAEESGQP->R<-S---------F--------M--RLND---24
CACNA1HG-ARAADE--V-RV-P--LGAPPPGPAALV>G<ASPESPGAPGRE--------A--ERGS---44
CACNA1I------SA-------------SPPSSSAAA>P<AA------------------E--PGVTTE-24
CACNA1S------------------------------>-<------------------------------
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.R15Tc.44G>C Putative BenignSIFT: tolerated
Polyphen: probably damaging
p.R15Gc.43A>G Other Cardiac PhenotypeSIFT:
Polyphen:
ReportsOther Cardiac Phenotype Cardiac channelopathy testing in 274 ethnically diverse sudden unexplained deaths. Forensic Sci Int. 2014 237:90-9. doi: 10.1016/j.forsciint.2014.01.014. 24631775