Paralogue Annotation for SCN5A residue 1543

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1543
Reference Amino Acid: V - Valine
Protein Domain: TM Domain 4


Paralogue Variants mapped to SCN5A residue 1543

No paralogue variants have been mapped to residue 1543 for SCN5A.



SCN5APLNKYQGFIFDIVTKQAFDVTIMFLICLNM>V<TMMVETDDQSPEKINILAKINLLFVAIFTG1573
SCN1APGNKFQGMVFDFVTRQVFDISIMILICLNM>V<TMMVETDDQSEYVTTILSRINLVFIVLFTG1586
SCN2APANKFQGMVFDFVTKQVFDISIMILICLNM>V<TMMVETDDQSQEMTNILYWINLVFIVLFTG1576
SCN3APANKFQGMVFDFVTRQVFDISIMILICLNM>V<TMMVETDDQGKYMTLVLSRINLVFIVLFTG1571
SCN4APQNKIQGMVYDLVTKQAFDITIMILICLNM>V<TMMVETDNQSQLKVDILYNINMIFIIIFTG1398
SCN7APLNKLQGFIFDVVTSQAFNVIVMVLICFQA>I<AMMIDTDVQSLQMSIALYWINSIFVMLYTM1296
SCN8APLNKIQGIVFDFVTQQAFDIVIMMLICLNM>V<TMMVETDTQSKQMENILYWINLVFVIFFTC1567
SCN9APGNKIQGCIFDLVTNQAFDISIMVLICLNM>V<TMMVEKEGQSQHMTEVLYWINVVFIILFTG1549
SCN10APLNKFQGFVFDIVTRQAFDITIMVLICLNM>I<TMMVETDDQSEEKTKILGKINQFFVAVFTG1521
SCN11APLNKCQGLVFDIVTSQIFDIIIISLIILNM>I<SMMAESYNQPKAMKSILDHLNWVFVVIFTL1411
CACNA1ANKQSFQYRMWQFVVSPPFEYTIMAMIALNT>I<VLMMKFYGASVAYENALRVFNIVFTSLFSL1611
CACNA1BNRQSFQYKTWTFVVSPPFEYFIMAMIALNT>V<VLMMKFYDAPYEYELMLKCLNIVFTSMFSM1517
CACNA1C--NQHQYKVWYVVNSTYFEYLMFVLILLNT>I<CLAMQHYGQSCLFKIAMNILNMLFTGLFTV1264
CACNA1D--NPYQYKFWYVVNSSPFEYMMFVLIMLNT>L<CLAMQHYEQSKMFNDAMDILNMVFTGVFTV1270
CACNA1ENRHTFQYRVWHFVVSPSFEYTIMAMIALNT>V<VLMMKYYSAPCTYELALKYLNIAFTMVFSL1523
CACNA1F--NPHQYRVWATVNSAAFEYLMFLLILLNT>V<ALAMQHYEQTAPFNYAMDILNMVFTGLFTI1235
CACNA1GDYSRFRLLVHHLCTSHYLDLFITGVIGLNV>V<TMAMEHYQQPQILDEALKICNYIFTVIFVL1656
CACNA1HDYSPTRRSIHSLCTSHYLDLFITFIICVNV>I<TMSMEHYNQPKSLDEALKYCNYVFTIVFVF1662
CACNA1ITYCHTRLLIHSMCTSHYLDIFITFIICLNV>V<TMSLEHYNQPTSLETALKYCNYMFTTVFVL1532
CACNA1S--NPYQYQVWYIVTSSYFEYLMFALIMLNT>I<CLGMQHYNQSEQMNHISDILNVAFTIIFTL1163
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.V1543Ac.4628T>C CardiomyopathyDCMSIFT:
Polyphen:
ReportsCardiomyopathyDCM Targeted sequence capture and GS-FLX Titanium sequencing of 23 hypertrophic and dilated cardiomyopathy genes: implementation into diagnostics. J Med Genet. 2013 50(9):614-26. doi: 10.1136/jmedgenet-2012-101231. 23785128
p.V1543Lc.4627G>C Putative BenignSIFT:
Polyphen: