Paralogue Annotation for SCN5A residue 1652

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1652
Reference Amino Acid: M - Methionine
Protein Domain: TM Domain 4


Paralogue Variants mapped to SCN5A residue 1652

No paralogue variants have been mapped to residue 1652 for SCN5A.



SCN5AFRVIRLARIGRILRLIRGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYSIFGMANFAYV1682
SCN1AFRVIRLARIGRILRLIKGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYAIFGMSNFAYV1695
SCN2AFRVIRLARIGRILRLIKGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYAIFGMSNFAYV1685
SCN3AFRVIRLARIGRILRLIKGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYAIFGMSNFAYV1680
SCN4AFRVIRLARIGRVLRLIRGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYSIFGMSNFAYV1507
SCN7AVQLILLSRIIHMLRLGKGPKVFHNLMLPLM>L<SLPALLNIILLIFLVMFIYAVFGMYNFAYV1405
SCN8AFRVIRLARIGRILRLIKGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIFSIFGMSNFAYV1676
SCN9AFRVIRLARIGRILRLVKGAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYAIFGMSNFAYV1658
SCN10AFRVIRLARIGRILRLIRAAKGIRTLLFALM>M<SLPALFNIGLLLFLVMFIYSIFGMSSFPHV1632
SCN11AFRIVRLARIGRILRLVRAARGIRTLLFALM>M<SLPSLFNIGLLLFLIMFIYAILGMNWFSKV1522
CACNA1ALRLFRA---ARLIKLLRQGYTIRILLWTFV>Q<SFKALPYVCLLIAMLFFIYAIIGMQVFGNI1717
CACNA1BLRLFRA---ARLIKLLRQGYTIRILLWTFV>Q<SFKALPYVCLLIAMLFFIYAIIGMQVFGNI1625
CACNA1CFRLFRV---MRLVKLLSRGEGIRTLLWTFI>K<SFQALPYVALLIVMLFFIYAVIGMQVFGKI1385
CACNA1DFRLFRV---MRLVKLLSRGEGIRTLLWTFI>K<SFQALPYVALLIAMLFFIYAVIGMQMFGKV1395
CACNA1ELKLFRA---ARLIKLLRQGYTIRILLWTFV>Q<SFKALPYVCLLIAMLFFIYAIIGMQVFGNI1632
CACNA1FFRLFRV---MRLVKLLSKGEGIRTLLWTFI>K<SFQALPYVALLIAMIFFIYAVIGMQMFGKV1352
CACNA1GIRIMRVLRIARVLKLLKMAVGMRALLDTVM>Q<ALPQVGNLGLLFMLLFFIFAALGVELFGDL1768
CACNA1HIRIMRVLRIARVLKLLKMATGMRALLDTVV>Q<ALPQVGNLGLLFMLLFFIYAALGVELFGRL1774
CACNA1IIRIMRVLRIARVLKLLKMATGMRALLDTVV>Q<ALPQVGNLGLLFMLLFFIYAALGVELFGKL1644
CACNA1SFRLFRV---MRLIKLLSRAEGVRTLLWTFI>K<SFQALPYVALLIVMLFFIYAVIGMQMFGKI1292
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.M1652Rc.4955T>G Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Gating properties of SCN5A mutations and the response to mexiletine in long-QT syndrome type 3 patients. Circulation. 2007 116(10):1137-44. 17698727
p.M1652Tc.4955T>C Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085