Paralogue Annotation for SCN5A residue 1780

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1780
Reference Amino Acid: E - Glutamate
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1780

No paralogue variants have been mapped to residue 1780 for SCN5A.



SCN5ALFFTTYIIISFLIVVNMYIAIILENFSVAT>E<ESTEPLSEDDFDMFYEIWEKFDPEATQFIE1810
SCN1AFFFVSYIIISFLVVVNMYIAVILENFSVAT>E<ESAEPLSEDDFEMFYEVWEKFDPDATQFME1824
SCN2AFFFVSYIIISFLVVVNMYIAVILENFSVAT>E<ESAEPLSEDDFEMFYEVWEKFDPDATQFIE1814
SCN3AFFFVSYIIISFLVVVNMYIAVILENFSVAT>E<ESAEPLSEDDFEMFYEVWEKFDPDATQFIE1809
SCN4ACFFCSYIIISFLIVVNMYIAIILENFNVAT>E<ESSEPLGEDDFEMFYETWEKFDPDATQFIA1636
SCN7AFYFVSYILISWLIIVNMYIVVVMEFLNIAS>K<KKNKTLSEDDFRKFFQVWKRFDPDRTQYID1534
SCN8AFFFVSYIIISFLIVVNMYIAIILENFSVAT>E<ESADPLSEDDFETFYEIWEKFDPDATQFIE1804
SCN9AFYFVSYIIISFLVVVNMYIAVILENFSVAT>E<ESTEPLSEDDFEMFYEVWEKFDPDATQFIE1787
SCN10AIFFTTYIIISFLIMVNMYIAVILENFNVAT>E<ESTEPLSEDDFDMFYETWEKFDPEATQFIT1760
SCN11ASYFVSYIIISFLIVVNMYIAVILENFNTAT>E<ESEDPLGEDDFDIFYEVWEKFDPEATQFIK1642
CACNA1AFYFVSFIFLCSFLMLNLFVAVIMDNFEYLT>R<DSSI-LGPHHLDEYVRVWAEYDPAACGRIH1848
CACNA1BFYFVSFIFLCSFLMLNLFVAVIMDNFEYLT>R<DSSI-LGPHHLDEFIRVWAEYDPAACGRIS1746
CACNA1CFYFISFYMLCAFLIINLFVAVIMDNFDYLT>R<DWSI-LGPHHLDEFKRIWAEYDPEAKGRIK1513
CACNA1DVYFISFYMLCAFLIINLFVAVIMDNFDYLT>R<DWSI-LGPHHLDEFKRIWSEYDPEAKGRIK1521
CACNA1EVYFVSFIFFCSFLMLNLFVAVIMDNFEYLT>R<DSSI-LGPHHLDEFVRVWAEYDRAACGRIH1760
CACNA1FAYFISFFMLCAFLIINLFVAVIMDNFDYLT>R<DWSI-LGPHHLDEFKRIWSEYDPGAKGRIK1478
CACNA1GIYFVSFVLTAQFVLVNVVIAVLMKHLEESN>K<EAKE---EAELEAELELEMKT-LSPQPHSP1885
CACNA1HVYFVTFVLVAQFVLVNVVVAVLMKHLEESN>K<EARE---DAELDAEIELEMAQGPGSARRVD1895
CACNA1ILYFVSFVLTAQFVLINVVVAVLMKHLDDSN>K<EAQE---DAEMDAELELEMAHGLGPGPRLP1765
CACNA1SYYFISFYMLCAFLVINLFVAVIMDNFDYLT>R<DWSI-LGPHHLDEFKAIWAEYDPEAKGRIK1418
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.E1780Gc.5339A>G Inherited ArrhythmiaSIFT:
Polyphen:
ReportsOther Disease Phenotype Loss-of-function of the voltage-gated sodium channel NaV1.5 (channelopathies) in patients with irritable bowel syndrome. Gastroenterology. 2014 146(7):1659-68. doi: 10.1053/j.gastro.2014.02.054. 24613995
Inherited ArrhythmiaBrS Testing the burden of rare variation in arrhythmia-susceptibility genes provides new insights into molecular diagnosis for Brugada syndrome. Hum Mol Genet. 2015 24(10):2757-63. doi: 10.1093/hmg/ddv036. 25650408