Paralogue Annotation for SCN5A residue 1790

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1790
Reference Amino Acid: D - Aspartate
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1790

No paralogue variants have been mapped to residue 1790 for SCN5A.



SCN5AFLIVVNMYIAIILENFSVATEESTEPLSED>D<FDMFYEIWEKFDPEATQFIEYSVLSDFADA1820
SCN1AFLVVVNMYIAVILENFSVATEESAEPLSED>D<FEMFYEVWEKFDPDATQFMEFEKLSQFAAA1834
SCN2AFLVVVNMYIAVILENFSVATEESAEPLSED>D<FEMFYEVWEKFDPDATQFIEFAKLSDFADA1824
SCN3AFLVVVNMYIAVILENFSVATEESAEPLSED>D<FEMFYEVWEKFDPDATQFIEFSKLSDFAAA1819
SCN4AFLIVVNMYIAIILENFNVATEESSEPLGED>D<FEMFYETWEKFDPDATQFIAYSRLSDFVDT1646
SCN7AWLIIVNMYIVVVMEFLNIASKKKNKTLSED>D<FRKFFQVWKRFDPDRTQYIDSSKLSDFAAA1544
SCN8AFLIVVNMYIAIILENFSVATEESADPLSED>D<FETFYEIWEKFDPDATQFIEYCKLADFADA1814
SCN9AFLVVVNMYIAVILENFSVATEESTEPLSED>D<FEMFYEVWEKFDPDATQFIEFSKLSDFAAA1797
SCN10AFLIMVNMYIAVILENFNVATEESTEPLSED>D<FDMFYETWEKFDPEATQFITFSALSDFADT1770
SCN11AFLIVVNMYIAVILENFNTATEESEDPLGED>D<FDIFYEVWEKFDPEATQFIKYSALSDFADA1652
CACNA1ASFLMLNLFVAVIMDNFEYLTRDSSI-LGPH>H<LDEYVRVWAEYDPAACGRIHYKDMYSLLRV1858
CACNA1BSFLMLNLFVAVIMDNFEYLTRDSSI-LGPH>H<LDEFIRVWAEYDPAACGRISYNDMFEMLKH1756
CACNA1CAFLIINLFVAVIMDNFDYLTRDWSI-LGPH>H<LDEFKRIWAEYDPEAKGRIKHLDVVTLLRR1523
CACNA1DAFLIINLFVAVIMDNFDYLTRDWSI-LGPH>H<LDEFKRIWSEYDPEAKGRIKHLDVVTLLRR1531
CACNA1ESFLMLNLFVAVIMDNFEYLTRDSSI-LGPH>H<LDEFVRVWAEYDRAACGRIHYTEMYEMLTL1770
CACNA1FAFLIINLFVAVIMDNFDYLTRDWSI-LGPH>H<LDEFKRIWSEYDPGAKGRIKHLDVVALLRR1488
CACNA1GQFVLVNVVIAVLMKHLEESNKEAKE---EA>E<LEAELELEMKT-LSPQPHSPLGSPF-LWPG1894
CACNA1HQFVLVNVVVAVLMKHLEESNKEARE---DA>E<LDAEIELEMAQGPGSARRVDADRP------1899
CACNA1IQFVLINVVVAVLMKHLDDSNKEAQE---DA>E<MDAELELEMAHGLGPGPRLPTGSPGAPGR-1774
CACNA1SAFLVINLFVAVIMDNFDYLTRDWSI-LGPH>H<LDEFKAIWAEYDPEAKGRIKHLDVVTLLRR1428
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.D1790Gc.5369A>G Inherited ArrhythmiaLQTS,BrSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Novel LQT-3 mutation affects Na+ channel activity through interactions between alpha- and beta1-subunits. Circ Res. 1998 83(2):141-6. 9686753
Inherited ArrhythmiaLQTS Effects of flecainide in patients with new SCN5A mutation: mutation-specific therapy for long-QT syndrome? Circulation. 2000 101(14):1698-706. 10758053
Inherited ArrhythmiaLQTS Genetic testing in the long QT syndrome: development and validation of an efficient approach to genotyping in clinical practice. JAMA. 2005 294(23):2975-80. 16414944
Inherited ArrhythmiaLQTS Mutation-specific risk in two genetic forms of type 3 long QT syndrome. Am J Cardiol. 2010 105(2):210-3. 20102920
Inherited ArrhythmiaLQTS Biophysical phenotypes of SCN5A mutations causing long QT and Brugada syndromes. FEBS Lett. 2000 487(2):224-8. 11150514
Inherited ArrhythmiaBrS Novel Clinical Manifestation of the Known SCN5A D1790G Mutation. Cardiology. 2015 132(4):228-32. doi: 10.1159/000437089. 26304620
p.D1790Nc.5368G>A Other Cardiac PhenotypeSIFT: deleterious
Polyphen: probably damaging
ReportsOther Cardiac Phenotype Autosomal recessive paediatric sick sinus syndrome associated with novel compound mutations in SCN5A. Int J Cardiol. 2012 23200271