Paralogue Annotation for SCN5A residue 1860

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1860
Reference Amino Acid: R - Arginine
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1860

No paralogue variants have been mapped to residue 1860 for SCN5A.



SCN5A---SLINMDLPMVSGD-RIHCMDILFAFTK>R<VLGES--G---EMDALKIQMEEKFMA---A1882
SCN1A---QLIAMDLPMVSGD-RIHCLDILFAFTK>R<VLGES--G---EMDALRIQMEERFMA---S1896
SCN2A---QLIAMDLPMVSGD-RIHCLDILFAFTK>R<VLGES--G---EMDALRIQMEERFMA---S1886
SCN3A---QLIAMDLPMVSGD-RIHCLDILFAFTK>R<VLGES--G---EMDALRIQMEDRFMA---S1881
SCN4A---KLITLDLPMVPGD-KIHCLDILFALTK>E<VLGDS--G---EMDALKQTMEEKFMA---A1708
SCN7A---QLIALDLPMAVGD-RIHCLDILLAFTK>R<VMGQD--V---RMEKVVSEIESGFLL---A1606
SCN8A---ELIAMDLPMVSGD-RIHCLDILFAFTK>R<VLGDS--G---ELDILRQQMEERFVA---S1876
SCN9A---QLIAMDLPMVSGD-RIHCLDILFAFTK>R<VLGES--G---EMDSLRSQMEERFMS---A1859
SCN10A---ILIQMDLPLVPGD-KIHCLDILFAFTK>N<VLGES--G---ELDSLKANMEEKFMA---T1832
SCN11A---QFLVMDLPMVSED-RLHCMDILFAFTA>R<VLGGS--D---GLDSMKAMMEEKFME---A1714
CACNA1AACKRLLRMDLPVADD-NTVHFNSTLMALIR>T<ALDIKIAKGGADKQQMDAELRKEMMAIW-P1932
CACNA1BAYKRLVRMNMPISNEDMTVHFTSTLMALIR>T<ALEIKLAPAGTKQHQCDAELRKEISVVW-A1831
CACNA1CACKRLVSMNMPLNSDG-TVMFNATLFALVR>T<ALRIKTEG---NLEQANEELRAIIKKIW-K1594
CACNA1DACKRLVAMNMPLNSDG-TVMFNATLFALVR>T<ALKIKTEG---NLEQANEELRAVIKKIW-K1602
CACNA1EAYKRLVLMNMPVAED-MTVHFTSTLMALIR>T<ALDIKIAKGGADRQQLDSELQKETLAIW-P1844
CACNA1FACKRLVAMNMPLNSDG-TVTFNATLFALVR>T<SLKIKTEG---NLEQANQELRIVIKKIW-K1559
CACNA1G---------HPAAHA-RSASHFSLEHPTDR>Q<LFDTI---S--LLIQGSLEWELKLMDEL-A1954
CACNA1H--------DAPN---------------LVA>R<KV----------------SVSRML-SLPND1930
CACNA1I---GLCRRCYSPAQE-N--LWLDSVSLIIK>D<SL----------------EGELTIIDNL-S1825
CACNA1SACKRLVGMNMPLNSDG-TVTFNATLFALVR>T<ALKIKTEG---NFEQANEELRAIIKKIW-K1499
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.R1860Sc.5580G>T Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Multiplex targeted high-throughput sequencing for Mendelian cardiac disorders. Clin Genet. 2014 85(4):365-70. doi: 10.1111/cge.12168. 23590259