Paralogue Annotation for SCN5A residue 1949

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1949
Reference Amino Acid: A - Alanine
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1949

No paralogue variants have been mapped to residue 1949 for SCN5A.



SCN5ARQ---------QAGSGLSEEDAPEREGL-I>A<YVM---------------------------1952
SCN1ANK---------NKIKG--GANLLIKEDM-I>I<DRI---------------------------1964
SCN2AKK---------DKGKE--CDGTPIKEDT-L>I<DKL---------------------------1954
SCN3ANK---------EAIKG--RIDLPIKQDM-I>I<DKL---------------------------1949
SCN4ARH---------SHDGS--GDDAPEKEGL-L>A<NTM-SKMY---------------------G1781
SCN7AMI---------DGDR----DVHATKEGA-Y>F<DKA---------------------------1672
SCN8A------------------------KKTT-S>N<KLE---------------------------1926
SCN9AIK---------DGDRD---DDLLNKKDM-A>F<DNV---------------------------1926
SCN10AVP---------RAEEE---AASLPDEGF-V>A<FTA---------------------------1899
SCN11A-Q-----------------------NDL-->-<--E---------------------------1763
CACNA1AEQDRTPLMFQRMEPPS------PTQ----->-<-EG-GP-G-------QNALPS-TQLDPGGA2017
CACNA1BLS----QMGPVSLFHP------LKATLE-Q>T<-QPAVLRGARVFLR-QKS--S-TSLSNGGA1926
CACNA1CPS--------QRNALS-L-QAGLRTL-H-D>I<GPE-IRRA-------ISG----DLTAEEE-1678
CACNA1DPA--------KNTTIA-L-QAGLRTL-H-D>I<GPE-IRRA-------ISC----DLQDDEP-1687
CACNA1EEQ-KNAPMFQRMEPSS------LPQ----->-<-EI-IA-N-------AKALPY-LQQDPVSG1928
CACNA1FAA--------PSTSSA-L-QAGLRSL-Q-D>L<GPE-MRQA-------LTC----DTEEEEE-1644
CACNA1G-------------SLA------LTD----->-<-DSLP--------DDMHTLLLSALESN-MQ2022
CACNA1HAE-SCASLQIPLAVSS------PAR----->-<-SGEPLHALSPRGTARSPSLSRLLCRQ-EA2018
CACNA1ILS-LEDPTACPPGRKD------SKG----->-<-ELDP-----PEPMRVGDLGECFFPLS-ST1912
CACNA1SRP--------KKDIVQ-I-QAGLRTI-EEE>A<APE-ICRT-------VSG----DLAAEEE-1583
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.A1949Sc.5845G>T Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
p.A1949Pc.5845G>C Inherited ArrhythmiaBrSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaBrS Novel sodium channel SCN5A mutations in Brugada syndrome patients from Greece. Int J Cardiol. 2010 145(1):45-8. 19406494
p.A1949Tc.5845G>A Putative BenignSIFT:
Polyphen: