Paralogue Annotation for SCN5A residue 1990

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 1990
Reference Amino Acid: V - Valine
Protein Domain: C-terminus


Paralogue Variants mapped to SCN5A residue 1990

No paralogue variants have been mapped to residue 1990 for SCN5A.



SCN5A--------------------RA-TSDN-LQ>V<RG----------------------------1992
SCN1A--------------------KP-IVEK-HE>-<------------------------------1998
SCN2A--------------------KP-EKEK-FE>-<------------------------------1987
SCN3A--------------------KP-DKEK-FE>-<------------------------------1982
SCN4A--------------------IS-PSDTAWP>-<------------------------------1818
SCN7A--------------------------K--->-<------------------------------1675
SCN8A--------------------KP-EKEK-QQ>R<AE----------------------------1962
SCN9A--------------------KP-DKEK-YE>-<------------------------------1959
SCN10A--------------------RG-LSDR-VN>M<RT----------------------------1936
SCN11A--------------------SF-GVAK--->-<------------------------------1785
CACNA1A-----GTDLSMTTQSGDLP------SK-ER>D<QERGRPKDR---------------------2206
CACNA1B-----SSAVGPGLPPGEGPTGC-RRER-ER>R<QERGRSQERRQPSSSSS----EKQRFYSCD2132
CACNA1CEEDKRDIRQSPKRGFLRSA-SL-GR-R-AS>F<HLECLKRQKDRGGDIS-----Q--------1916
CACNA1DSPVCYDSRRSPRRRLLPPT-PASHR-R-SS>F<NFECLRRQSSQEEVPSSPIFPH--------1965
CACNA1E-----KSDT----------------HR-SG>G<RERGRSKERKHLLSPDV----SRCN--SEE2104
CACNA1FAQRYMDGHLVPRRRLLPPT-PA-GR-K-PS>F<TIQCLQRQGSCEDLPIPGTY----------1823
CACNA1G------SHSKISKHMTPPA-PCPGP-E-PN>W<GKGPPETRSSLELDTE--------------2220
CACNA1H------------------G-PEASP-V-AG>G<E-----------------------------2129
CACNA1I-----------RRALGPPA-PAPGP-R-AG>L<S-----------------------------2060
CACNA1S-------PATRGRALGQPCRVL-GP-H-SK>P<CVEMLKG-----------------------1724
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.V1990Lc.5968G>C Putative BenignSIFT:
Polyphen:
ReportsUnknown Novel genotype-phenotype associations demonstrated by high-throughput sequencing in patients with hypertrophic cardiomyopathy. Heart. 2015 101(4):294-301. doi: 10.1136/heartjnl-2014-306387. 25351510
p.V1990Mc.5968G>A Putative BenignSIFT:
Polyphen: