Paralogue Annotation for SCN5A residue 462

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 462
Reference Amino Acid: E - Glutamate
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 462

No paralogue variants have been mapped to residue 462 for SCN5A.



SCN5AVDTVS---------------------RSSL>E<MSPLAPVNSHERRSKRRKR----MS-SGTE487
SCN1ATATAS----EHSREPSAAGRL----SDSSS>E<ASKLSSKSAKERRNRRKKRKQKEQS-GGEE514
SCN2AAAASA-----ESRDFSGAGGIGVF-SESSS>V<ASKLSSKSEKELKNRRKKKKQKEQS-GEEE518
SCN3AAASAA------SRDFSGIGGLGEL-LESSS>E<ASKLSSKSAKEWRNRRKKRRQREHL-EGNN516
SCN4AAAQAL------------------------->-<------------------------E-GGEA496
SCN7A------------------------------>-<------------------------------
SCN8AMATSAGTVSEDAIEEEGEEGG-GS-PRSSS>E<ISKLSSKSAKERRNRRKKRKQKELS-EGEE508
SCN9AAAAAE----YTSIRRSRIMGL----SESSS>E<TSKLSSKSAKERRNRRKKKNQKKLS-SGEE493
SCN10AIDTTS---------------------LHSH>N<GSPLTSKNASERRHRIKPRV----S-EGST471
SCN11AIDRSS---------------------LTSL>E<TSYFTPKKRKLFGNKKRKS----FF-LRES474
CACNA1AEE-----------------VILAEDETD-->-<------------------------------410
CACNA1BEE-----------------VMLAEEDRN-->-<------------------------------406
CACNA1CED-----------------IDPENEDEG-->-<------------------------------455
CACNA1DED-----------------IDPENEEEG-->-<------------------------------456
CACNA1EEE-----------------VMLAEENKN-->-<------------------------------401
CACNA1FEE-----------------LDMEDPSAD-->-<---------------------DNLG-SM--428
CACNA1GAR-------------RLAQVSRA--AGVR->-<---------------------VGLLSSPAP470
CACNA1HKR-------------RSLRLYARW-QSRW->-<---------------------RK-KVDPSA494
CACNA1IKR-------------RALGLYQAL-QSRR->-<---------------------QA-L-GPEA471
CACNA1SEV-----------------MDVEDFREG-->-<------------------------------384
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.E462Ac.1385A>C Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
p.E462Kc.1384G>A Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS High prevalence of genetic variants previously associated with LQT syndrome in new exome data. Eur J Hum Genet. 2012 20(8):905-8. doi: 10.1038/ejhg.2012.23. 22378279
Unknown Actionable exomic incidental findings in 6503 participants: challenges of variant classification. Genome Res. 2015 25(3):305-15. doi: 10.1101/gr.183483.114. 25637381