Paralogue Annotation for SCN5A residue 506

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 506
Reference Amino Acid: M - Methionine
Protein Domain: Interdomain Linker I-II


Paralogue Variants mapped to SCN5A residue 506

No paralogue variants have been mapped to residue 506 for SCN5A.



SCN5A----MS-SGTE-ECGEDRLPKSDSEDGPRA>M<--N-------------------HLSLTRGL515
SCN1AKQKEQS-GGEE-KDE-DEFQKSESEDSIRR>K<--GFRFSIEGNRLTYEKRYSSPHQSLLSIR560
SCN2AKQKEQS-GEEE-KND--RVRKSESEDSIRR>K<--GFRFSLEGSRLTYEKRFSSPHQSLLSIR563
SCN3ARQREHL-EGNN-KGERDSFPKSESEDSVKR>S<--SFLFSMDGNRLTSDKKFCSPHQSLLSIR563
SCN4A-----E-GGEA-DGD--------------->-<------------------------------499
SCN7A------------------------------>-<------------------------------
SCN8AKQKELS-EGEE-KGDPEKVFKSESEDGMRR>K<--AFRLP-D-NRIG--RKFSIMNQSLLSIP551
SCN9ANQKKLS-SGEE-KGDAEKLSKSESEDSIRR>K<--SFHLGVEGHRRAHEKRLSTPNQSPLSIR540
SCN10AV----S-EGST-ED--NKSPRSDPYN-Q-->-<------------------------RRMSFL490
SCN11A----FF-LRES-GKD--QPPGSDSDE---->-<------------------------------486
CACNA1A--------------GEQRH----------->-<------------------------------415
CACNA1B--------------AEEKS----------->-<------------------------------411
CACNA1C--------------MD-------------->-<------------------------------457
CACNA1D--------------GE-------------->-<------------------------------458
CACNA1E--------------AGTSA----------->-<------------------------------406
CACNA1F--DNLG-SM-----AE-------------->-<------------------------------430
CACNA1G--VGLLSSPAP-LGGQETQPSSSCSRSHRR>L<--SV-HHLVH------HHHHHHHHYHL-GN509
CACNA1H--RK-KVDPSA-VQGQGPGHRQRRAG---R>H<TASVHHLVYH------HHHHHHHHYHF-SH533
CACNA1I--QA-L-GPEAPAPAK-PGPHAKEPR---H>Y<HGKTKGQGDE------GRHLGSRHCQT-LH510
CACNA1S--------------KL-------------->-<------------------------------386
cons                              > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.M506Kc.1517T>A Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Results of genetic testing in 855 consecutive unrelated patients referred for long QT syndrome in a clinical laboratory. Genet Test Mol Biomarkers. 2013 17(7):553-61. doi: 10.1089/gtmb.2012.0118. 23631430
p.M506Ic.1518G>A Putative BenignSIFT:
Polyphen: