Paralogue Annotation for SCN5A residue 9

Residue details

Gene: SCN5A
Reference Sequences: LRG: LRG_289, Ensembl variant: ENST00000333535 / ENSP00000328968
Amino Acid Position: 9
Reference Amino Acid: G - Glycine
Protein Domain: N-terminus


Paralogue Variants mapped to SCN5A residue 9

No paralogue variants have been mapped to residue 9 for SCN5A.



SCN5A----MAN-F-L-------------LPR>G<TSSFRRFTRESLAAIEKRMAEK-QARGSTT38
SCN1A---MEQT-V-L-------------VPP>G<PDSFNFFTRESLAAIERRIAEE-KAKNPKP39
SCN2A---MAQS-V-L-------------VPP>G<PDSFRFFTRESLAAIEQRIAEE-KAKRPKQ39
SCN3A---MAQA-L-L-------------VPP>G<PESFRLFTRESLAAIEKRAAEE-KAKKPKK39
SCN4AMARPSLC-T-L-------------VPL>G<PECLRPFTRESLAAIEQRAVEE-EARLQRN42
SCN7A--------M-L-------------ASP>E<PKGLVPFTKESFELIKQHIAKT--------28
SCN8A---MAAR-L-L-------------APP>G<PDSFKPFTPESLANIERRIAES-KLKKPPK39
SCN9A-----MA-M-L-------------PPP>G<PQSFVHFTKQSLALIEQRIAER-KSKEPKE37
SCN10A----MEF-P-I-------------GSL>E<TNNFRRFTPESLVEIEKQIAAKQGT-KKAR38
SCN11A-MDDRCY-P-V-------------IFP>D<ERNFRPFTSDSLAAIEKRIAIQ-KEKKKSK41
CACNA1AMARF-----GD----EM-PARYGG--->-<--------GGSGAAAGV-------------23
CACNA1BMVRF-----GD----EL-GGRYGG--->-<--------PGGGERA---------------21
CACNA1CMVNENTR--MYIPEENHQGSNYGS--->-<--------PR-PAHANMN--------A-NA34
CACNA1DMMMM-----MMMKKMQHQRQQQAD--->-<----H--ANE-ANYARGT--------R-LP33
CACNA1EMARF-----GE----AV-VARPGS--->-<-----------GDGD---------------18
CACNA1FMSES-----E----GG----KDTT--->-<--------PE-PSPAN--------------18
CACNA1GMDEE-ED--GA-------------GAE>E<SGQP-R-S---------F--------M--R21
CACNA1HMTEG-ARAADE--V-RV-P--LGAPPP>G<PAALVGASPESPGAPGRE--------A--E41
CACNA1IMAE------SA-------------SPP>S<SSAAAPAA------------------E--P19
CACNA1SMEP------------------------>-<------------------------------3
cons                           > <                              

See full Alignment of Paralogues


Known Variants in SCN5A

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.G9Vc.26G>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Spectrum of pathogenic mutations and associated polymorphisms in a cohort of 44 unrelated patients with long QT syndrome. Clin Genet. 2006 70(3):214-27. 16922724
Inherited ArrhythmiaLQTS Characterization of N-terminally mutated cardiac Na(+) channels associated with long QT syndrome 3 and Brugada syndrome. Front Physiol. 2013 4:153. doi: 10.3389/fphys.2013.00153. eCollection 23805106
p.G9Sc.25G>A Putative BenignSIFT:
Polyphen: