CASQ2 variants in ExAC


The table below lists the CASQ2 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 116283343 c.420+6T>C splice site 0.78716546
2. 116310967 c.196A>G p.T66A missense 0.32650136
3. 116268184 c.738-10_738-8delTTT splice site 0.12500840
4. 116268184 c.738-10_738-7delTTTT splice site 0.11119328
5. 116268184 c.738-10_738-9delTT splice site 0.10648739
6. 116268184 c.738-10_738-6delTTTTT splice site 0.04504202
7. 116268184 c.738-10_738-5delTTTTTTinsTTTTT splice site 0.03198319
8. 116310937 c.226G>A p.V76M missense 0.02505849
9. 116268184 c.738-10_738-5delTTTTTT splice site 0.01099160
10. 116269619 c.731A>G p.H244R missense 0.00829226
11. 116245533 c.1014+9C>T splice site 0.00668028
12. 116243877 c.1185_1187delCGA p.Asp396del inframe 0.00549260
13. 116275561 c.567C>G p.F189L missense 0.00069217
14. 116247824 c.928G>A p.D310N missense 0.00063438
15. 116280896 c.481A>G p.I161V missense 0.00058480
16. 116243915 c.1147_1149delGAT p.Asp383del inframe 0.00042302
17. 116245571 c.985C>T p.P329S missense 0.00035216
18. 116247878 c.874G>T p.A292S missense 0.00023925
19. 116280902 c.475G>A p.E159K missense 0.00023886
20. 116269620 c.730C>T p.H244Y missense 0.00023270
21. 116243931 c.1131A>T p.E377D missense 0.00015699
22. 116275601 c.533-6C>T splice site 0.00010718
23. 116243914 c.1148A>G p.D383G missense 0.00009129
24. 116243876 c.1186G>A p.D396N missense 0.00008381
25. 116244010 c.1052A>G p.D351G missense 0.00008304
26. 116268154 c.758G>A p.R253H missense 0.00008291
27. 116247859 c.893A>G p.N298S missense 0.00006593
28. 116269607 c.737+6T>A splice site 0.00005922
29. 116268164 c.748C>T p.R250C missense 0.00004961
30. 116247875 c.877C>T p.R293W missense 0.00004948
31. 116275582 c.546delT frameshift 0.00004945
32. 116310990 c.173A>T p.E58V missense 0.00004942
33. 116245613 c.943G>A p.V315I missense 0.00004837
34. 116244050 c.1015-3C>T splice site 0.00004335
35. 116283431 c.338G>A p.S113N missense 0.00004157
36. 116247829 c.923C>T p.P308L missense 0.00004119
37. 116311048 c.115G>A p.E39K missense 0.00004119
38. 116245585 c.971T>C p.I324T missense 0.00003556
39. 116244016 c.1046A>T p.D349V missense 0.00003333
40. 116243916 c.1146_1147insGAT p.Asp383dup inframe 0.00003318
41. 116243934 c.1128_1130delTGA p.Asp376del inframe 0.00003305
42. 116247883 c.869A>T p.Q290L missense 0.00003302
43. 116247874 c.878G>A p.R293Q missense 0.00003299
44. 116280963 c.421-7A>T splice site 0.00003295
45. 116310927 c.234+2T>C essential splice site 0.00003295
46. 116280898 c.479G>A p.R160H missense 0.00003295
47. 116311019 c.144A>C p.K48N missense 0.00003295
48. 116245609 c.947C>T p.A316V missense 0.00002870
49. 116245568 c.988C>G p.Q330E missense 0.00002637
50. 116269735 c.615G>T p.K205N missense 0.00002537
51. 116268160 c.752G>A p.R251H missense 0.00002487
52. 116283407 c.362G>A p.R121H missense 0.00002478
53. 116311060 c.103G>C p.V35L missense 0.00002472
54. 116280944 c.433C>T p.P145S missense 0.00002471
55. 116269607 c.737+6T>C splice site 0.00001974
56. 116269617 c.733C>T p.Q245X nonsense 0.00001822
57. 116245574 c.982A>G p.R328G missense 0.00001762
58. 116269749 c.607-6T>C splice site 0.00001708
59. 116244034 c.1028G>A p.Trp343Ter nonsense 0.00001695
60. 116287487 c.281T>C p.V94A missense 0.00001685
61. 116244031 c.1031T>A p.M344K missense 0.00001684
62. 116269677 c.673A>G p.I225V missense 0.00001673
63. 116269700 c.650A>G p.Y217C missense 0.00001671
64. 116247903 c.849A>C p.E283D missense 0.00001670
65. 116283434 c.335G>A p.G112E missense 0.00001665
66. 116244011 c.1051G>A p.D351N missense 0.00001661
67. 116247892 c.860T>A p.I287N missense 0.00001655
68. 116283408 c.361C>T p.R121C missense 0.00001652
69. 116243897 c.1165G>T p.D389Y missense 0.00001651
70. 116283360 c.409T>C p.F137L missense 0.00001651
71. 116247854 c.898G>A p.D300N missense 0.00001648
72. 116275565 c.563A>G p.H188R missense 0.00001648
73. 116247833 c.919G>A p.D307N missense 0.00001648
74. 116280899 c.478C>T p.R160C missense 0.00001647
75. 116280902 c.475G>T p.E159X nonsense 0.00001647
76. 116280886 c.491A>G p.Y164C missense 0.00001647
77. 116280908 c.469G>C p.A157P missense 0.00001647
78. 116280874 c.503T>C p.I168T missense 0.00001647
79. 116280895 c.482T>C p.I161T missense 0.00001647
80. 116269612 c.737+1G>A essential splice site 0.00000941
81. 116245607 c.949T>C p.Y317H missense 0.00000932
82. 116245534 c.1014+8T>A splice site 0.00000909
83. 116245537 c.1014+5G>C splice site 0.00000905
84. 116245565 c.991A>T p.I331F missense 0.00000879
85. 116247921 c.839-8T>A splice site 0.00000873
86. 116287533 c.235C>T p.L79F missense 0.00000871
87. 116311155 c.8G>C p.R3T missense 0.00000865
88. 116244047 c.1015G>A p.A339T missense 0.00000861
89. 116287523 c.245A>G p.Q82R missense 0.00000860
90. 116311152 c.11C>T p.T4I missense 0.00000857
91. 116269748 c.607-5T>A splice site 0.00000854
92. 116283459 c.320-10T>C splice site 0.00000854
93. 116244040 c.1022G>A p.S341N missense 0.00000852
94. 116287511 c.257A>G p.H86R missense 0.00000851
95. 116311148 c.15C>G p.H5Q missense 0.00000848
96. 116287503 c.265A>G p.I89V missense 0.00000848
97. 116287499 c.269G>A p.G90D missense 0.00000846
98. 116311145 c.18G>T p.L6F missense 0.00000845
99. 116269645 c.705G>T p.E235D missense 0.00000845
100. 116269732 c.618delA p.Lys206AsnfsTer4 frameshift 0.00000844
101. 116244030 c.1032G>A p.M344I missense 0.00000842
102. 116269728 c.622T>C p.S208P missense 0.00000842
103. 116268173 c.739C>T p.P247S missense 0.00000841
104. 116287479 c.289A>G p.K97E missense 0.00000841
105. 116269658 c.692C>T p.P231L missense 0.00000840
106. 116269718 c.632T>C p.M211T missense 0.00000840
107. 116269717 c.633G>T p.M211I missense 0.00000839
108. 116269659 c.691C>A p.P231T missense 0.00000839
109. 116269710 c.640G>T p.V214F missense 0.00000838
110. 116269711 c.639G>C p.E213D missense 0.00000838
111. 116268172 c.740C>T p.P247L missense 0.00000837
112. 116268172 c.740C>G p.P247R missense 0.00000837
113. 116269710 c.640delG p.Val214LeufsTer28 frameshift 0.00000837
114. 116269683 c.667G>A p.E223K missense 0.00000836
115. 116269701 c.649T>C p.Y217H missense 0.00000836
116. 116311129 c.34T>A p.Y12N missense 0.00000832
117. 116283432 c.337A>C p.S113R missense 0.00000831
118. 116243912 c.1150A>C p.N384H missense 0.00000829
119. 116268167 c.745C>G p.L249V missense 0.00000829
120. 116268160 c.752G>T p.R251L missense 0.00000829
121. 116247890 c.862C>G p.L288V missense 0.00000827
122. 116283393 c.376G>C p.D126H missense 0.00000826
123. 116268163 c.749G>T p.R250L missense 0.00000826
124. 116243928 c.1134T>A p.D378E missense 0.00000826
125. 116268163 c.749G>A p.R250H missense 0.00000826
126. 116283356 c.413T>C p.L138P missense 0.00000826
127. 116283402 c.367A>G p.I123V missense 0.00000826
128. 116243931 c.1131_1133delAGA p.Glu377del inframe 0.00000826
129. 116283389 c.380G>A p.G127D missense 0.00000826
130. 116268161 c.751C>T p.R251C missense 0.00000826
131. 116243981 c.1081T>A p.W361R missense 0.00000826
132. 116243969 c.1093G>C p.V365L missense 0.00000825
133. 116243890 c.1172A>G p.D391G missense 0.00000825
134. 116268155 c.757C>A p.R253S missense 0.00000825
135. 116247882 c.870G>T p.Q290H missense 0.00000825
136. 116243936 c.1126G>T p.D376Y missense 0.00000825
137. 116243896 c.1166A>G p.D389G missense 0.00000825
138. 116243940 c.1122T>A p.D374E missense 0.00000825
139. 116311098 c.65G>A p.G22E missense 0.00000825
140. 116268129 c.783G>A p.W261X nonsense 0.00000825
141. 116243879 c.1183G>A p.D395N missense 0.00000825
142. 116243965 c.1097T>C p.L366P missense 0.00000825
143. 116268148 c.764A>G p.E255G missense 0.00000825
144. 116247877 c.875C>A p.A292D missense 0.00000825
145. 116243931 c.1131_1139delAGATGATGA p.Glu377_Asp379del inframe 0.00000825
146. 116243917 c.1145A>G p.D382G missense 0.00000825
147. 116311099 c.64G>A p.G22R missense 0.00000825
148. 116310981 c.182C>T p.S61F missense 0.00000824
149. 116310934 c.229C>T p.L77F missense 0.00000824
150. 116260490 c.809T>C p.I270T missense 0.00000824
151. 116247808 c.939+5G>C splice site 0.00000824
152. 116247819 c.933T>A p.F311L missense 0.00000824
153. 116280843 c.532+2T>C essential splice site 0.00000824
154. 116247854 c.898G>T p.D300Y missense 0.00000824
155. 116275550 c.578T>A p.I193N missense 0.00000824
156. 116311030 c.133G>T p.V45F missense 0.00000824
157. 116280928 c.449G>T p.S150I missense 0.00000824
158. 116280881 c.496A>C p.K166Q missense 0.00000824
159. 116275587 c.541G>C p.A181P missense 0.00000824
160. 116311083 c.80C>T p.T27I missense 0.00000824
161. 116275523 c.605G>C p.G202A missense 0.00000824
162. 116310950 c.213A>C p.Q71H missense 0.00000824
163. 116260506 c.793T>G p.L265V missense 0.00000824
164. 116311065 c.98G>A p.R33Q missense 0.00000824
165. 116247868 c.884A>G p.N295S missense 0.00000824
166. 116243866 c.1196A>C p.E399A missense 0.00000824
167. 116247806 c.939+7G>T splice site 0.00000824
168. 116243868 c.1194_1196dupTGA p.Asp398dup inframe 0.00000824
169. 116310926 c.234+3A>G splice site 0.00000824
170. 116280902 c.475G>C p.E159Q missense 0.00000824
171. 116260464 c.835C>T p.P279S missense 0.00000824
172. 116275586 c.542_548delCTTTTGA p.Ala181GlufsTer27 frameshift 0.00000824
173. 116280889 c.488A>T p.D163V missense 0.00000824
174. 116247826 c.926A>T p.D309V missense 0.00000824
175. 116275587 c.541G>A p.A181T missense 0.00000824
176. 116275539 c.589G>T p.A197S missense 0.00000824
177. 116310951 c.212A>C p.Q71P missense 0.00000824
178. 116310943 c.220G>T p.Glu74Ter nonsense 0.00000824
179. 116247826 c.926A>G p.D309G missense 0.00000824
180. 116311018 c.145T>C p.Y49H missense 0.00000824
181. 116311066 c.97C>T p.R33X nonsense 0.00000824
182. 116247869 c.883A>T p.N295Y missense 0.00000824
183. 116275572 c.556G>A p.A186T missense 0.00000824
184. 116260516 c.784-1G>A essential splice site 0.00000824
185. 116311086 c.77C>T p.P26L missense 0.00000824
186. 116260466 c.833A>G p.D278G missense 0.00000824
187. 116280896 c.481A>C p.I161L missense 0.00000824
188. 116275587 c.541delG p.Ala181LeufsTer29 frameshift 0.00000824
189. 116275547 c.581A>C p.K194T missense 0.00000824
190. 116260460 c.838+1G>A essential splice site 0.00000824
191. 116280954 c.423A>G splice site 0.00000824
192. 116280945 c.432C>G p.D144E missense 0.00000824
193. 116280913 c.464T>C p.V155A missense 0.00000824
194. 116275595 c.533A>G p.Y178C missense 0.00000824
195. 116275581 c.547G>A p.E183K missense 0.00000824
196. 116311071 c.92A>G p.K31R missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.