LDB3 variants in ExAC


The table below lists the LDB3 variants found in the ExAC population database. Click on each variant for more details, including presence in the 1000 Genomes and Exome Sequencing Project databases, a breakdown by ethnic class and the variant's role in inherited cardiac disease. Use the form below to customise the variant selection. The table can be sorted by variant location, variant type or ExAC frequency.




No. Genomic coord. Variant (CDS) Variant (Protein) Variant Type ExAC frequencyPopulations*
1. 88439193 c.163G>A p.V55I missense 0.00722224
2. 88478529 c.1903G>A p.V635I missense 0.00698874
3. 88451715 c.752A>G p.K251R missense 0.00664512
4. 88441223 c.352G>A p.V118M missense 0.00462955
5. 88439895 c.302C>T p.P101L missense 0.00314283
6. 88451649 c.690-4A>G splice site 0.00235880
7. 88441570 c.689+10G>A splice site 0.00147331
8. 88439888 c.295C>T p.P99S missense 0.00080127
9. 88441337 c.466G>A p.A156T missense 0.00067197
10. 88476312 c.1460G>A p.R487H missense 0.00065289
11. 88469687 c.1111G>A p.A371T missense 0.00063088
12. 88476387 c.1535A>C p.Q512P missense 0.00062910
13. 88476524 c.1672A>G p.I558V missense 0.00060161
14. 88441437 c.566C>T p.S189L missense 0.00057078
15. 88466442 c.1051A>G p.T351A missense 0.00051044
16. 88441535 c.664G>A p.A222T missense 0.00040299
17. 88476446 c.1594G>C p.A532P missense 0.00038602
18. 88486007 c.2092G>A p.A698T missense 0.00030864
19. 88441364 c.493C>T p.R165W missense 0.00025954
20. 88441258 c.387_395dupCCCAGGCAC p.Pro130_Thr132dup inframe 0.00022314
21. 88476414 c.1562A>G p.Y521C missense 0.00021605
22. 88466433 c.1042G>A p.A348T missense 0.00019926
23. 88469801 c.1225C>A p.Q409K missense 0.00019528
24. 88451678 c.715G>A p.V239I missense 0.00018140
25. 88441431 c.560C>T p.P187L missense 0.00017658
26. 88485932 c.2017G>A p.D673N missense 0.00017304
27. 88469681 c.1105A>G p.S369G missense 0.00017023
28. 88476458 c.1606G>A p.V536I missense 0.00013574
29. 88451757 c.794G>A p.R265H missense 0.00013194
30. 88466436 c.1045T>A p.S349T missense 0.00013059
31. 88441313 c.442C>T p.R148W missense 0.00012885
32. 88476105 c.1253C>G p.P418R missense 0.00012533
33. 88451756 c.793C>T p.R265C missense 0.00012370
34. 88466440 c.1049C>T p.T350I missense 0.00012237
35. 88476231 c.1379C>T p.A460V missense 0.00011717
36. 88477741 c.1697T>G p.M566R missense 0.00011541
37. 88441401 c.530C>T p.A177V missense 0.00011101
38. 88476116 c.1264G>A p.A422T missense 0.00010882
39. 88441481 c.610G>A p.A204T missense 0.00010122
40. 88428495 c.47G>A p.R16H missense 0.00010001
41. 88476492 c.1640G>A p.R547Q missense 0.00009751
42. 88466427 c.1036G>A p.A346T missense 0.00009476
43. 88466383 c.992C>T p.A331V missense 0.00009239
44. 88476282 c.1430A>G p.Y477C missense 0.00009100
45. 88477867 c.1823C>T p.P608L missense 0.00009061
46. 88441421 c.550A>G p.K184E missense 0.00008435
47. 88476164 c.1312A>G p.T438A missense 0.00008327
48. 88476263 c.1411C>T p.P471S missense 0.00008286
49. 88476294 c.1442C>G p.P481R missense 0.00008270
50. 88476339 c.1487T>C p.F496S missense 0.00008264
51. 88476527 c.1675C>T p.R559W missense 0.00008256
52. 88441215 c.344G>A p.G115D missense 0.00007732
53. 88466346 c.955G>A p.A319T missense 0.00007544
54. 88476287 c.1435G>A p.G479R missense 0.00007445
55. 88476189 c.1337C>A p.T446N missense 0.00007335
56. 88466466 c.1075G>A p.D359N missense 0.00006983
57. 88441397 c.526G>A p.G176R missense 0.00006840
58. 88441403 c.532C>G p.R178G missense 0.00006825
59. 88476491 c.1639C>T p.R547W missense 0.00006774
60. 88478536 c.1910C>T p.A637V missense 0.00006594
61. 88492699 c.2150T>G p.L717R missense 0.00006163
62. 88428539 c.91C>T p.R31W missense 0.00005898
63. 88441452 c.581A>T p.Q194L missense 0.00005846
64. 88451732 c.769G>C p.E257Q missense 0.00005771
65. 88478530 c.1904T>G p.V635G missense 0.00005769
66. 88441547 c.676G>A p.G226R missense 0.00005316
67. 88441527 c.656G>A p.R219Q missense 0.00005228
68. 88485965 c.2050G>A p.E684K missense 0.00004945
69. 88477842 c.1798C>T p.R600X nonsense 0.00004942
70. 88476506 c.1654G>A p.G552S missense 0.00004447
71. 88466392 c.1001C>A p.P334Q missense 0.00004202
72. 88466335 c.944C>T p.P315L missense 0.00004190
73. 88451687 c.724G>A p.A242T missense 0.00004123
74. 88478474 c.1858-10T>C splice site 0.00004122
75. 88439190 c.160G>A p.G54S missense 0.00004122
76. 88476165 c.1313C>A p.T438N missense 0.00003831
77. 88492723 c.2174T>C p.I725T missense 0.00003703
78. 88441539 c.668C>T p.S223L missense 0.00003519
79. 88441526 c.655C>T p.R219X nonsense 0.00003486
80. 88441340 c.469G>C p.E157Q missense 0.00003448
81. 88441269 c.398C>T p.P133L missense 0.00003433
82. 88441278 c.407C>T p.P136L missense 0.00003433
83. 88441258 c.387_395delCCCAGGCAC p.Pro130_Thr132del inframe 0.00003433
84. 88441404 c.533G>A p.R178Q missense 0.00003408
85. 88466409 c.1018G>C p.A340P missense 0.00003373
86. 88466278 c.897-10G>A splice site 0.00003363
87. 88466296 c.905T>C p.I302T missense 0.00003355
88. 88428502 c.54G>T p.Q18H missense 0.00003337
89. 88478598 c.1972G>A p.E658K missense 0.00003311
90. 88476324 c.1472T>A p.V491E missense 0.00003305
91. 88478583 c.1957G>A p.G653R missense 0.00003303
92. 88439865 c.272C>T p.T91M missense 0.00003299
93. 88439873 c.280C>A p.P94T missense 0.00003299
94. 88485941 c.2026G>A p.V676M missense 0.00003296
95. 88477747 c.1703G>A p.R568H missense 0.00003296
96. 88477843 c.1799G>A p.R600Q missense 0.00003295
97. 88476528 c.1676G>A p.R559Q missense 0.00002780
98. 88492723 c.2174T>A p.I725N missense 0.00002778
99. 88441517 c.646A>T p.M216L missense 0.00002596
100. 88441365 c.494G>A p.R165Q missense 0.00002590
101. 88441209 c.338C>T p.T113M missense 0.00002577
102. 88441214 c.343G>C p.G115R missense 0.00002577
103. 88441283 c.412C>G p.L138V missense 0.00002574
104. 88441415 c.544G>A p.G182S missense 0.00002538
105. 88441479 c.608C>T p.S203L missense 0.00002530
106. 88466398 c.1007delT p.Leu336ArgfsTer156 frameshift 0.00002522
107. 88428461 c.13_14insTGACCC p.Val5_Thr6insThrLeu inframe 0.00002498
108. 88476255 c.1403A>G p.N468S missense 0.00002488
109. 88451808 c.845C>T p.T282M missense 0.00002486
110. 88476381 c.1529G>A p.S510N missense 0.00002482
111. 88476297 c.1445C>T p.A482V missense 0.00002481
112. 88476338 c.1486T>G p.F496V missense 0.00002479
113. 88476354 c.1502C>T p.A501V missense 0.00002479
114. 88451780 c.817C>T p.R273C missense 0.00002476
115. 88485989 c.2074G>A p.D692N missense 0.00002476
116. 88439846 c.253C>T p.R85C missense 0.00002474
117. 88439175 c.145G>C p.V49L missense 0.00002473
118. 88477740 c.1696A>G p.M566V missense 0.00002473
119. 88439175 c.145G>A p.V49M missense 0.00002473
120. 88477758 c.1714C>A p.P572T missense 0.00002472
121. 88452285 c.860-7C>T splice site 0.00002471
122. 88477830 c.1786G>A p.V596I missense 0.00002471
123. 88452319 c.887G>A p.R296Q missense 0.00002471
124. 88476168 c.1316C>T p.P439L missense 0.00002106
125. 88476164 c.1312A>C p.T438P missense 0.00002082
126. 88476173 c.1321C>T p.P441S missense 0.00002011
127. 88476140 c.1288A>G p.T430A missense 0.00001807
128. 88469796 c.1220T>C p.V407A missense 0.00001765
129. 88492675 c.2126T>C p.F709S missense 0.00001763
130. 88492683 c.2134_2136delAAG p.Lys712del inframe 0.00001756
131. 88476141 c.1289C>T p.T430I missense 0.00001755
132. 88441362 c.491C>T p.P164L missense 0.00001731
133. 88441379 c.508G>A p.A170T missense 0.00001720
134. 88441322 c.451G>A p.A151T missense 0.00001719
135. 88441229 c.358C>A p.P120T missense 0.00001719
136. 88441239 c.368G>A p.S123N missense 0.00001718
137. 88441314 c.443G>A p.R148Q missense 0.00001718
138. 88441244 c.373G>A p.E125K missense 0.00001718
139. 88441266 c.395C>T p.T132I missense 0.00001718
140. 88441199 c.328G>A p.A110T missense 0.00001716
141. 88441293 c.422C>T p.T141I missense 0.00001714
142. 88441396 c.525G>C p.E175D missense 0.00001711
143. 88469691 c.1115T>C p.V372A missense 0.00001705
144. 88469706 c.1130C>T p.A377V missense 0.00001702
145. 88441486 c.615G>C p.E205D missense 0.00001695
146. 88441431 c.560C>A p.P187Q missense 0.00001682
147. 88466382 c.991G>A p.A331T missense 0.00001680
148. 88439915 c.321+1G>A essential splice site 0.00001679
149. 88466305 c.914C>A p.A305E missense 0.00001677
150. 88466331 c.940A>G p.T314A missense 0.00001676
151. 88476108 c.1256C>A p.S419Y missense 0.00001672
152. 88441446 c.575C>T p.P192L missense 0.00001672
153. 88476234 c.1382A>C p.Y461S missense 0.00001671
154. 88441453 c.582A>C p.Q194H missense 0.00001670
155. 88428504 c.56G>C p.G19A missense 0.00001668
156. 88428461 c.13G>A p.V5M missense 0.00001665
157. 88476398 c.1546C>T p.R516W missense 0.00001658
158. 88476399 c.1547G>A p.R516Q missense 0.00001658
159. 88477720 c.1677-1G>A essential splice site 0.00001655
160. 88476372 c.1520C>A p.T507N missense 0.00001654
161. 88476345 c.1493A>G p.Q498R missense 0.00001653
162. 88478583 c.1957G>C p.G653R missense 0.00001652
163. 88451792 c.829A>T p.I277F missense 0.00001652
164. 88439889 c.296C>T p.P99L missense 0.00001652
165. 88439831 c.246-8T>A splice site 0.00001650
166. 88439874 c.281C>T p.P94L missense 0.00001650
167. 88439835 c.246-4A>G splice site 0.00001650
168. 88451676 c.713C>A p.A238D missense 0.00001649
169. 88439847 c.254G>A p.R85H missense 0.00001649
170. 88451760 c.797G>A p.R266H missense 0.00001649
171. 88485915 c.2000C>T p.T667I missense 0.00001649
172. 88478511 c.1885T>C p.W629R missense 0.00001648
173. 88477888 c.1844C>G p.T615S missense 0.00001648
174. 88477833 c.1789T>A p.Y597N missense 0.00001647
175. 88476535 c.1676+7T>C splice site 0.00001514
176. 88476533 c.1676+5G>T splice site 0.00001473
177. 88476519 c.1667A>G p.N556S missense 0.00001248
178. 88476507 c.1655G>T p.G552V missense 0.00001116
179. 88476506 c.1654G>C p.G552R missense 0.00001112
180. 88476489 c.1637G>A p.S546N missense 0.00000957
181. 88466457 c.1066A>C p.S356R missense 0.00000933
182. 88492651 c.2102A>G p.H701R missense 0.00000928
183. 88492653 c.2104G>T p.V702L missense 0.00000923
184. 88476144 c.1292C>A p.P431H missense 0.00000905
185. 88476140 c.1288A>T p.T430S missense 0.00000903
186. 88492712 c.2163C>A p.H721Q missense 0.00000896
187. 88492666 c.2117G>T p.G706V missense 0.00000895
188. 88469806 c.1230A>T splice site 0.00000894
189. 88441561 c.689+1G>A essential splice site 0.00000893
190. 88492668 c.2119C>T p.Q707X nonsense 0.00000892
191. 88492705 c.2156A>C p.K719T missense 0.00000887
192. 88492672 c.2123C>T p.P708L missense 0.00000886
193. 88476473 c.1621C>T p.R541X nonsense 0.00000881
194. 88492680 c.2131T>G p.S711A missense 0.00000879
195. 88476141 c.1289C>A p.T430N missense 0.00000878
196. 88469786 c.1210C>G p.R404G missense 0.00000874
197. 88469786 c.1210C>T p.R404W missense 0.00000874
198. 88476213 c.1361C>T p.T454I missense 0.00000872
199. 88469763 c.1187G>A p.R396Q missense 0.00000863
200. 88441367 c.496G>T p.A166S missense 0.00000863
201. 88441343 c.472G>A p.A158T missense 0.00000862
202. 88441340 c.469G>A p.E157K missense 0.00000862
203. 88441343 c.472G>T p.A158S missense 0.00000862
204. 88441380 c.509C>T p.A170V missense 0.00000860
205. 88441506 c.635A>T p.Q212L missense 0.00000860
206. 88441289 c.418C>G p.P140A missense 0.00000859
207. 88469736 c.1160G>T p.G387V missense 0.00000859
208. 88441227 c.356C>T p.A119V missense 0.00000859
209. 88441384 c.513G>T p.K171N missense 0.00000859
210. 88441248 c.377C>G p.A126G missense 0.00000859
211. 88441268 c.397C>T p.P133S missense 0.00000858
212. 88441184 c.322-9C>T splice site 0.00000858
213. 88441304 c.433G>T p.A145S missense 0.00000858
214. 88441188 c.322-5G>T splice site 0.00000858
215. 88441286 c.415A>G p.R139G missense 0.00000858
216. 88441280 c.409G>A p.E137K missense 0.00000858
217. 88469742 c.1166C>G p.A389G missense 0.00000858
218. 88441299 c.428G>T p.S143I missense 0.00000857
219. 88441391 c.520C>T p.P174S missense 0.00000857
220. 88469728 c.1152C>A p.Y384X nonsense 0.00000854
221. 88469729 c.1153A>G p.S385G missense 0.00000854
222. 88469723 c.1147A>G p.S383G missense 0.00000853
223. 88441403 c.532C>T p.R178W missense 0.00000853
224. 88441496 c.625G>C p.E209Q missense 0.00000853
225. 88469662 c.1086G>A splice site 0.00000851
226. 88469696 c.1120G>A p.A374T missense 0.00000851
227. 88469709 c.1133C>T p.P378L missense 0.00000851
228. 88469670 c.1094C>T p.A365V missense 0.00000850
229. 88441490 c.619C>G p.L207V missense 0.00000849
230. 88466418 c.1027A>G p.T343A missense 0.00000849
231. 88476224 c.1372G>A p.A458T missense 0.00000846
232. 88441485 c.614A>C p.E205A missense 0.00000846
233. 88476453 c.1601G>T p.G534V missense 0.00000844
234. 88466407 c.1016C>G p.A339G missense 0.00000843
235. 88476225 c.1373C>G p.A458G missense 0.00000843
236. 88441428 c.557T>C p.L186P missense 0.00000842
237. 88476126 c.1274G>A p.S425N missense 0.00000840
238. 88466383 c.992C>A p.A331E missense 0.00000840
239. 88466388 c.997T>A p.S333T missense 0.00000840
240. 88466358 c.967C>T p.P323S missense 0.00000839
241. 88466305 c.914C>G p.A305G missense 0.00000839
242. 88466361 c.970C>T p.P324S missense 0.00000839
243. 88466362 c.971C>T p.P324L missense 0.00000839
244. 88476121 c.1269T>G p.N423K missense 0.00000838
245. 88466336 c.945_972delGCTGCTGCCCGCTTCTGCCCAGCCACCT p.Ala319LeufsTer164 frameshift 0.00000838
246. 88428524 c.76C>T p.P26S missense 0.00000837
247. 88476105 c.1253C>T p.P418L missense 0.00000836
248. 88451830 c.859+8C>T splice site 0.00000835
249. 88476237 c.1385C>T p.T462I missense 0.00000834
250. 88428503 c.55G>C p.G19R missense 0.00000834
251. 88428459 c.11G>A p.S4N missense 0.00000833
252. 88451825 c.859+3G>C splice site 0.00000833
253. 88428479 c.31G>A p.G11R missense 0.00000833
254. 88428491 c.43T>C p.F15L missense 0.00000833
255. 88478612 c.1978+8C>A splice site 0.00000831
256. 88476249 c.1397C>T p.A466V missense 0.00000830
257. 88476399 c.1547G>T p.R516L missense 0.00000829
258. 88476270 c.1418C>A p.P473H missense 0.00000828
259. 88476392 c.1540C>G p.L514V missense 0.00000828
260. 88476266 c.1414G>C p.A472P missense 0.00000828
261. 88478599 c.1973A>G p.E658G missense 0.00000828
262. 88476389 c.1537A>G p.T513A missense 0.00000828
263. 88478599 c.1973A>C p.E658A missense 0.00000828
264. 88476390 c.1538C>A p.T513N missense 0.00000828
265. 88476366 c.1514G>A p.S505N missense 0.00000827
266. 88476291 c.1439G>A p.G480D missense 0.00000827
267. 88476279 c.1427C>T p.A476V missense 0.00000827
268. 88476290 c.1438G>A p.G480S missense 0.00000827
269. 88476368 c.1516delA p.Thr506ProfsTer59 frameshift 0.00000827
270. 88476317 c.1465C>T p.P489S missense 0.00000826
271. 88478580 c.1954G>C p.D652H missense 0.00000826
272. 88476323 c.1471G>A p.V491M missense 0.00000826
273. 88478589 c.1963C>A p.P655T missense 0.00000826
274. 88451789 c.826C>T p.R276C missense 0.00000826
275. 88439242 c.212C>G p.S71C missense 0.00000826
276. 88476357 c.1505C>T p.P502L missense 0.00000826
277. 88478584 c.1958G>A p.G653E missense 0.00000826
278. 88476332 c.1480G>A p.D494N missense 0.00000826
279. 88451790 c.827G>A p.R276H missense 0.00000826
280. 88478564 c.1938C>A p.S646R missense 0.00000825
281. 88451763 c.800C>T p.S267F missense 0.00000825
282. 88439214 c.184C>T p.H62Y missense 0.00000825
283. 88451664 c.701T>A p.I234N missense 0.00000825
284. 88451781 c.818G>A p.R273H missense 0.00000825
285. 88451759 c.796C>T p.R266C missense 0.00000825
286. 88451747 c.784G>A p.E262K missense 0.00000825
287. 88451678 c.715G>T p.V239L missense 0.00000825
288. 88439127 c.97A>T p.T33S missense 0.00000825
289. 88477730 c.1686T>A p.F562L missense 0.00000825
290. 88451753 c.790G>A p.A264T missense 0.00000825
291. 88451658 c.695T>G p.L232R missense 0.00000825
292. 88439208 c.178A>T p.M60L missense 0.00000825
293. 88439883 c.290A>G p.Q97R missense 0.00000825
294. 88451663 c.700A>G p.I234V missense 0.00000825
295. 88439211 c.181A>C p.T61P missense 0.00000825
296. 88451673 c.710T>G p.L237R missense 0.00000825
297. 88452328 c.896G>A p.S299N missense 0.00000824
298. 88451741 c.778G>A p.A260T missense 0.00000824
299. 88451707 c.744_745delTG p.Val249AspfsTer2 frameshift 0.00000824
300. 88439166 c.136G>T p.G46C missense 0.00000824
301. 88452300 c.868C>A p.P290T missense 0.00000824
302. 88485917 c.2002A>G p.K668E missense 0.00000824
303. 88478529 c.1903G>T p.V635F missense 0.00000824
304. 88478484 c.1858G>A p.E620K missense 0.00000824
305. 88478508 c.1882delA p.Thr628HisfsTer75 frameshift 0.00000824
306. 88477785 c.1741A>C p.K581Q missense 0.00000824
307. 88451696 c.733G>A p.V245I missense 0.00000824
308. 88485977 c.2062C>T p.H688Y missense 0.00000824
309. 88439197 c.167A>G p.N56S missense 0.00000824
310. 88451727 c.764_765insGCCAGAACAT p.Asp258HisfsTer5 frameshift 0.00000824
311. 88477755 c.1711C>T p.H571Y missense 0.00000824
312. 88452301 c.869C>T p.P290L missense 0.00000824
313. 88485944 c.2029G>A p.E677K missense 0.00000824
314. 88477904 c.1857+3A>G splice site 0.00000824
315. 88478479 c.1858-5C>A splice site 0.00000824
316. 88478539 c.1913C>A p.A638D missense 0.00000824
317. 88485941 c.2026delG p.Val676TrpfsTer27 frameshift 0.00000824
318. 88477833 c.1789T>C p.Y597H missense 0.00000824
319. 88477789 c.1745C>G p.T582S missense 0.00000824
320. 88477887 c.1843A>G p.T615A missense 0.00000824
321. 88451731 c.768_770delAGA p.Glu257del inframe 0.00000824
322. 88485964 c.2049C>G p.I683M missense 0.00000824
323. 88452309 c.877G>T p.E293X nonsense 0.00000824
324. 88451727 c.764A>G p.K255R missense 0.00000824
325. 88477780 c.1736A>G p.Y579C missense 0.00000824
326. 88451705 c.742G>A p.A248T missense 0.00000824
327. 88478481 c.1858-3C>T splice site 0.00000824
328. 88478545 c.1919A>G p.K640R missense 0.00000824
329. 88439142 c.112G>A p.A38T missense 0.00000824
330. 88478520 c.1894A>G p.T632A missense 0.00000824
331. 88477784 c.1740C>A p.C580X nonsense 0.00000824
332. 88477826 c.1782C>A p.N594K missense 0.00000824

* This highlights the relative frequency of the variant in the ExAC populations - Non-Finnish European, African, East Asian, South Asian, American and Finnish. Higher frequencies are denoted by darker shades of green, variants absent in a population are coloured light gray.

Genomic coordinates refer to the GRCh37 release of the human genome.