Paralogue Annotation for CACNA1C residue 670

Residue details

Gene: CACNA1C
Reference Sequences: LRG: LRG_334, Ensembl variant: ENST00000399655 / ENSP00000382563
Amino Acid Position: 670
Reference Amino Acid: M - Methionine
Protein Domain: TM domain 2


Paralogue Variants mapped to CACNA1C residue 670

ParalogueVariantAssociated DiseaseMapping QualityConsensusPubmed
SCN5AM858LPhenotype modifierHigh9 24948852

To assess whether the paralogue annotation here confidently predicts that variation at this residue is pathogenic, it is important to check the reports in the Pubmed links above to ascertain that the mutations in these paralogues have been proved likely to be disease-causing. It is also important to check that the direction of effect of the variant in the paralogue is compatible with your observed phenotype in CACNA1C.



CACNA1CLVASLLNSVRSIASLLLLLFLFIIIFSLLG>M<QLFGGKFNFD-E------------MQTRRS687
CACNA1ALVVSLLNSMKSIISLLFLLFLFIVVFALLG>M<QLFGGQFNFD-E------------G-TPPT649
CACNA1BLVVSLLNSMKSIISLLFLLFLFIVVFALLG>M<QLFGGQFNFQ-D------------E-TPTT645
CACNA1DLVASLLNSMKSIASLLLLLFLFIIIFSLLG>M<QLFGGKFNFD-E------------TQTKRS706
CACNA1ELVVSLMSSMKSIISLLFLLFLFIVVFALLG>M<QLFGGRFNFN-D------------G-TPSA638
CACNA1FLVASLLNSMKSIASLLLLLFLFIIIFSLLG>M<QLFGGKFNFD-Q------------THTKRS692
CACNA1GQLVVLMKTMDNVATFCMLLMLFIFIFSILG>M<HLFGCKFASER---------DG-DTLPDRK904
CACNA1HQLVVLVKTMDNVATFCTLLMLFIFIFSILG>M<HLFGCKFSLKTD--------TG-DTVPDRK955
CACNA1IQLVVLMKTMDNVATFCMLLMLFIFIFSILG>M<HIFGCKFSLRTD--------TG-DTVPDRK802
CACNA1SLVASLLNSIRSIASLLLLLFLFIVIFALLG>M<QLFGGRYDFE-D------------TEVRRS595
SCN10ALIKIIGNSVGALGNLTIILAIIVFVFALVG>K<QLLGENYRNN-RKN----I-SAPHEDWPRW830
SCN11ALIKIIGNSVGALGSLTVVLVIVIFIFSVVG>M<QLFGRSFNSQ-KSPKLCNPTGPTVSCLRHW749
SCN1ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKDC-VCK----I-AS-DCQLPRW932
SCN2ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKEC-VCK----I-SN-DCELPRW923
SCN3ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKEC-VCK----I-ND-DCTLPRW924
SCN4ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKEC-VCK----I-AL-DCNLPRW742
SCN5ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKNYSEL-RDS----D-SG---LLPRW879
SCN7ALMWSLSNSWVALKDLVLLLFTFIFFSAAFG>M<KLFGKNYEEF-VCH----I-DK-DCQLPRW669
SCN8ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKEC-VCK----I-NQ-DCELPRW917
SCN9ALIKIIGNSVGALGNLTLVLAIIVFIFAVVG>M<QLFGKSYKEC-VCK----I-ND-DCTLPRW897
cons                              > <                              

See full Alignment of Paralogues


Known Variants in CACNA1C

There are currently no reported variants at residue 670 for CACNA1C.