Paralogue Annotation for KCNH2 residue 1093

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 1093
Reference Amino Acid: P - Proline
Protein Domain: C-terminus


Paralogue Variants mapped to KCNH2 residue 1093

No paralogue variants have been mapped to residue 1093 for KCNH2.



KCNH2----------------------GPGPTSTS>P<LL-----PVSPLP-TLTLDSLSQVSQFMAC1117
KCNH1HSF-------------YPIPEQTLQATVLE>V<RH-----ELKEDIKALNAKMTNIEKQLSEI954
KCNH3GP-------------CPRAS-----GEGPC>P<ASTSGLLQPLCVDTGASSYCLQPPAGSVLS958
KCNH4----------------GHPAGSAWTPDPPC>P<QL-----RP-----PCLSPCASRPPPSLQD950
KCNH5HPF-------------YPIPEQALQTTLQE>V<KH-----ELKEDIQLLSCRMTALEKQVAEI938
KCNH6----------------------KTLAPSSE>Q<EQ-----PEGLWP-PLASPLHPLEVQGLIC959
KCNH7YQR-------------PIIQLMRTSQPEAS>I<KT-----DRSFSPSSQCPEFLDLEKSKLKS1122
KCNH8SRFCSLHSTSVCPSRESLQTRTSWSAHQPC>L<HL-----QTGGAAYTQAQLCSSNITSDIWS960
CNGA1------------------------------>-<------------------------------
CNGA2------------------------------>-<------------------------------
CNGA3------------------------------>-<------------------------------
CNGA4------------------------------>-<------------------------------
CNGB1---------------------LGRPEGEEE>G<PA-----EPEEHSVRIC-------------1226
CNGB3---------------------VRR----TV>L<PR-----GTSRQSLIIS-------------787
HCN1LQ-----------------AG----G---R>S<T--------------VP-QRVTLFRQMSSG848
HCN2-------------------------S---S>T<-------------PRLG-P-----------850
HCN3-------------------------G---S>E<-------------R-LP-PSGLL-------745
HCN4S------------------------S---G>G<LG-----PPGRPYGAIPGQHVTLPRKTSSG1159
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.P1093Lc.3278C>T Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
p.P1093Rc.3278C>G Putative BenignSIFT:
Polyphen: