Paralogue Annotation for KCNH2 residue 42

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 42
Reference Amino Acid: I - Isoleucine
Protein Domain: N-terminus


Paralogue Variants mapped to KCNH2 residue 42

No paralogue variants have been mapped to residue 42 for KCNH2.



KCNH2QSRK-----------FIIANA-RVEN-CAV>I<-YCNDGFCELCGYSRAEVMQRPCTCDFLHG71
KCNH1NDTN-----------FVLGNA-QIVD-WPI>V<-YSNDGFCKLSGYHRAEVMQKSSTCSFMYG72
KCNH3THSN-----------FVLGNA-QVAGLFPV>V<-YCSDGFCDLTGFSRAEVMQRGCACSFLYG72
KCNH4THSN-----------FLLANA-QGTRGFPI>V<-YCSDGFCELTGYGRTEVMQKTCSCRFLYG72
KCNH5SESS-----------FLLGNA-QIVD-WPV>V<-YSNDGFCKLSGYHRADVMQKSSTCSFMYG70
KCNH6QSRK-----------FLIANA-QMEN-CAI>I<-YCNDGFCELFGYSRVEVMQQPCTCDFLTG71
KCNH7QNKK-----------FIIANA-RVQN-CAI>I<-YCNDGFCEMTGFSRPDVMQKPCTCDFLHG71
KCNH8THSN-----------FILANA-QVAKGFPI>V<-YCSDGFCELAGFARTEVMQKSCSCKFLFG72
CNGA1E------------I---------------->R<-RMEN-------------------------36
CNGA2------------------------------>-<--NHNHHA------PPA-----------IK25
CNGA3-------------L---------------->K<VKTSD-----------------------RD24
CNGA4------------------------------>-<------------------------------
CNGB1AEISEMNSPSRRVLTWLMKGVEKVIP-QPV>H<-SITE----------------DPAQILGHG132
CNGB3------------------------------>-<------------------------------
HCN1NS---------------------------->-<------------------------------9
HCN2GE---------------------------->-<------------------------------12
HCN3AA---------------------------->-<------------------------------9
HCN4EE---------------------------->-<---EDAEEEG-AGGRQDPSRRSIRLRPLPS55
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.I42Nc.125T>A Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Long QT and Brugada syndrome gene mutations in New Zealand. Heart Rhythm. 2007 4(10):1306-14. 17905336
Inherited ArrhythmiaLQTS Large-scale mutational analysis of Kv11.1 reveals molecular insights into type 2 long QT syndrome. Nat Commun. 2014 5:5535. doi: 10.1038/ncomms6535. 25417810
p.I42Sc.125T>G Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Asymmetry of parental origin in long QT syndrome: preferential maternal transmission of KCNQ1 variants linked to channel dysfunction. Eur J Hum Genet. 2016 24(8):1160-6. doi: 10.1038/ejhg.2015.257. 26669661
p.Ile42Thrc.125T>C UnknownSIFT:
Polyphen: