Paralogue Annotation for KCNH2 residue 49

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 49
Reference Amino Acid: C - Cysteine
Protein Domain: N-terminus


Paralogue Variants mapped to KCNH2 residue 49

No paralogue variants have been mapped to residue 49 for KCNH2.



KCNH2-------FIIANA-RVEN-CAVI-YCNDGF>C<ELCGYSRAEVMQRPCTCDFLHGPRTQRRAA79
KCNH1-------FVLGNA-QIVD-WPIV-YSNDGF>C<KLSGYHRAEVMQKSSTCSFMYGELTDKDTI80
KCNH3-------FVLGNA-QVAGLFPVV-YCSDGF>C<DLTGFSRAEVMQRGCACSFLYGPDTSELVR80
KCNH4-------FLLANA-QGTRGFPIV-YCSDGF>C<ELTGYGRTEVMQKTCSCRFLYGPETSEPAL80
KCNH5-------FLLGNA-QIVD-WPVV-YSNDGF>C<KLSGYHRADVMQKSSTCSFMYGELTDKKTI78
KCNH6-------FLIANA-QMEN-CAII-YCNDGF>C<ELFGYSRVEVMQQPCTCDFLTGPNTPSSAV79
KCNH7-------FIIANA-RVQN-CAII-YCNDGF>C<EMTGFSRPDVMQKPCTCDFLHGPETKRHDI79
KCNH8-------FILANA-QVAKGFPIV-YCSDGF>C<ELAGFARTEVMQKSCSCKFLFGVETNEQLM80
CNGA1-----I----------------R-RMEN-->-<------------------------------36
CNGA2-------------------------NHNHH>A<------PPA-----------IKANGK-DDH32
CNGA3-----L----------------KVKTSD-->-<--------------------RDLNRA-EN-30
CNGA4------------------------------>-<------------------------------
CNGB1PSRRVLTWLMKGVEKVIP-QPVH-SITE-->-<-------------DPAQILGHGSTGDTGCT140
CNGB3------------------------------>-<------------------------------
HCN1------------------------------>-<------------------------------
HCN2------------------------------>-<------------------------------
HCN3------------------------------>-<------------------------------
HCN4--------------------------EDAE>E<EG-AGGRQDPSRRSIRLRPLPSPSPSAAAG63
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.C49Yc.146G>A Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Genetic testing in the long QT syndrome: development and validation of an efficient approach to genotyping in clinical practice. JAMA. 2005 294(23):2975-80. 16414944
Inherited ArrhythmiaLQTS Large-scale mutational analysis of Kv11.1 reveals molecular insights into type 2 long QT syndrome. Nat Commun. 2014 5:5535. doi: 10.1038/ncomms6535. 25417810
p.C49Rc.145T>C Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Asymmetry of parental origin in long QT syndrome: preferential maternal transmission of KCNQ1 variants linked to channel dysfunction. Eur J Hum Genet. 2016 24(8):1160-6. doi: 10.1038/ejhg.2015.257. 26669661
p.Cys49Trpc.147C>G UnknownSIFT:
Polyphen: