Paralogue Annotation for KCNH2 residue 490

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 490
Reference Amino Acid: A - Alanine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNH2 residue 490

No paralogue variants have been mapped to residue 490 for KCNH2.



KCNH2MFIVDI-LINFRTTYVN-ANEEVVSHPGRI>A<VHYFKGW-FLIDMVAAIPFDLLIFGSGSEE519
KCNH1IFLVDI-VLNFHTTFVG-PAGEVISDPKLI>R<MNYLKTW-FVIDLLSCLPYDVINAFENVDE317
KCNH3LFILDI-VLNFRTTFVS-KSGQVVFAPKSI>C<LHYVTTW-FLLDVIAALPFDLLHAF-KVN-326
KCNH4LFILDI-ILNFRTTYVS-QSGQVISAPRSI>G<LHYLATW-FFIDLIAALPFDLLYIF-NIT-328
KCNH5IFLVDI-VLNFHTTFVG-PGGEVISDPKLI>R<MNYLKTW-FVIDLLSCLPYDIINAFENVDE314
KCNH6MFVVDI-VINFRTTYVN-TNDEVVSHPRRI>A<VHYFKGW-FLIDMVAAIPFDLLIFRTGSDE367
KCNH7MFIIDI-LINFRTTYVN-QNEEVVSDPAKI>A<IHYFKGW-FLIDMVAAIPFDLLIFGSGSDE518
KCNH8LFIIDI-ILNFRTTYVS-KSGQVIFEARSI>C<IHYVTTW-FIIDLIAALPFDLLYAF-NVT-322
CNGA1VYLIDM-FVRTRTGYLE--QGLLVKEELKL>I<NKYKSNLQFKLDVLSLIPTDLLYFKLGWNY267
CNGA2VYIADL-FIRLRTGFLE--QGLLVKDTKKL>R<DNYIHTLQFKLDVASIIPTDLIYFAVDIHS242
CNGA3LYVLDV-LVRARTGFLE--QGLMVSDTNRL>W<QHYKTTTQFKLDVLSLVPTDLAYLKVGTNY270
CNGA4LYLLDM-VVRFHTGFLE--QGILVVDKGRI>S<SRYVRTWSFFLDLASLMPTDVVYVRLGPHT136
CNGB1IYFLDITVFQTRLQFVR--GGDIITDKKDM>R<NNYLKSRRFKMDLLSLLPLDFLYLKVGVN-758
CNGB3IYLYDMLFIQPRLQFVR--GGDIIVDSNEL>R<KHYRTSTKFQLDVASIIPFDICYLFFGFN-320
HCN1VFLLDL-IMNFRTGTVNEDSSEIILDPKVI>K<MNYLKSW-FVVDFISSIPVDYIFLIVEK--241
HCN2FFLMDL-VLNFRTGIVIEDNTEIILDPEKI>K<KKYLRTW-FVVDFVSSIPVDYIFLIVEK--310
HCN3FFLLDL-VLNFRTGIVVEEGAEILLAPRAI>R<TRYLRTW-FLVDLISSIPVDYIFLVVELEP194
HCN4FFLIDL-VLNFRTGIVVEDNTEIILDPQRI>K<MKYLKSW-FMVDFISSIPVDYIFLIVET--361
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.A490Pc.1468G>C Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS A novel mutation in human ether-a-go-go-related gene, alanine to proline at position 490, found in a large family with autosomal dominant long QT syndrome. Am J Cardiol. 2007 99(12):1737-40. 17560885
p.A490Tc.1468G>A Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Bradycardia-induced long QT syndrome caused by a de novo missense mutation in the S2-S3 inner loop of HERG. Am J Med Genet. 2001 98(4):348-52. 11170080
Inherited ArrhythmiaLQTS Mutation site dependent variability of cardiac events in Japanese LQT2 form of congenital long-QT syndrome. Circ J. 2008 72(5):694-9. 18441445
Inherited ArrhythmiaLQTS Protective effect of KCNH2 single nucleotide polymorphism K897T in LQTS families and identification of novel KCNQ1 and KCNH2 mutations. BMC Med Genet. 2008 9:87. 18808722
Inherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS Atrioventricular block-induced Torsades de Pointes with clinical and molecular backgrounds similar to congenital long QT syndrome. Circ J. 2010 74(12):2562-71. 20975234
Inherited ArrhythmiaLQTS An in vivo cardiac assay to determine the functional consequences of putative long QT syndrome mutations. Circ Res. 2013 112(5):826-30. doi: 10.1161/CIRCRESAHA.112.300664. 23303164