Paralogue Annotation for KCNH2 residue 623

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 623
Reference Amino Acid: T - Threonine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNH2 residue 623

No paralogue variants have been mapped to residue 623 for KCNH2.



KCNH2---------LGGPSIKDKYVTALYFTFSSL>T<SVGFGNVSPNTNSEKIFSICVMLIGSLMYA653
KCNH1--S--GK-WEGGPSKNSVYISSLYFTMTSL>T<SVGFGNIAPSTDIEKIFAVAIMMIGSLLYA492
KCNH3EANGTGLELLGGPSLRSAYITSLYFALSSL>T<SVGFGNVSANTDTEKIFSICTMLIGALMHA494
KCNH4--------SVGGPSRRSAYIAALYFTLSSL>T<SVGFGNVCANTDAEKIFSICTMLIGALMHA468
KCNH5--A--GI-WEGGPSKDSLYVSSLYFTMTSL>T<TIGFGNIAPTTDVEKMFSVAMMMVGSLLYA461
KCNH6--P------ASGPSVQDKYVTALYFTFSSL>T<SVGFGNVSPNTNSEKVFSICVMLIGSLMYA505
KCNH7--S------SSGPSIKDKYVTALYFTFSSL>T<SVGFGNVSPNTNSEKIFSICVMLIGSLMYA656
KCNH8--------TLGGPSIRSAYIAALYFTLSSL>T<SVGFGNVSANTDAEKIFSICTMLIGALMHA463
CNGA1----------EFGRLARKYVYSLYWSTLTL>T<TIG-ETPPPVRDSEYVFVVVDFLIGVLIFA390
CNGA2----------EYGYLAREYIYCLYWSTLTL>T<TIG-ETPPPVKDEEYLFVIFDFLIGVLIFA365
CNGA3----------EHGRLSRKYIYSLYWSTLTL>T<TIG-ETPPPVKDEEYLFVVVDFLVGVLIFA393
CNGA4----------GFERLRRQYLYSFYFSTLIL>T<TVG-DTPPPAREEEYLFMVGDFLLAVMGFA259
CNGB1-------------GVGNSYIRCYYFAVKTL>I<TIG-GLPDPKTLFEIVFQLLNYFTGVFAFS873
CNGB3-------------GEGNEYLRCYYWAVRTL>I<TIG-GLPEPQTLFEIVFQLLNFFSGVFVFS435
HCN1----------VNDSWGKQYSYALFKAMSHM>L<CIGYGAQAPVSMSDLWITMLSMIVGATCYA387
HCN2----------VNHSWSELYSFALFKAMSHM>L<CIGYGRQAPESMTDIWLTMLSMIVGATCYA456
HCN3----------VNHSWGRQYSHALFKAMSHM>L<CIGYGQQAPVGMPDVWLTMLSMIVGATCYA340
HCN4----------VNNSWGKQYSYALFKAMSHM>L<CIGYGRQAPVGMSDVWLTMLSMIVGATCYA507
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.T623Ic.1868C>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Most LQT2 mutations reduce Kv11.1 (hERG) current by a class 2 (trafficking-deficient) mechanism. Circulation. 2006 113(3):365-73. 16432067
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
Inherited ArrhythmiaLQTS An in vivo cardiac assay to determine the functional consequences of putative long QT syndrome mutations. Circ Res. 2013 112(5):826-30. doi: 10.1161/CIRCRESAHA.112.300664. 23303164
p.T623Ac.1867A>G Inherited ArrhythmiaLQTSSIFT:
Polyphen:
ReportsInherited ArrhythmiaLQTS Asymmetry of parental origin in long QT syndrome: preferential maternal transmission of KCNQ1 variants linked to channel dysfunction. Eur J Hum Genet. 2016 24(8):1160-6. doi: 10.1038/ejhg.2015.257. 26669661