Paralogue Annotation for KCNH2 residue 96

Residue details

Gene: KCNH2
Reference Sequences: LRG: LRG_288, Ensembl variant: ENST00000262186 / ENSP00000262186
Amino Acid Position: 96
Reference Amino Acid: I - Isoleucine
Protein Domain: N-terminus


Paralogue Variants mapped to KCNH2 residue 96

No paralogue variants have been mapped to residue 96 for KCNH2.



KCNH2-------------GAEE-R-------KVE->I<AFYRK-----------DGS-----------104
KCNH1-------------NYEM-N-------SFE->I<LMYKK-----------NRT-----------105
KCNH3-------------EHKE-F-------KAE->L<ILYRK-----------SGL-----------105
KCNH4-------------GHQE-H-------RAE->I<CFYRK-----------DGS-----------105
KCNH5-------------NYES-N-------CFE->V<LLYKK-----------NRT-----------103
KCNH6-------------GAEE-C-------KVD->I<LYYRK-----------DAS-----------104
KCNH7-------------GSEE-R-------KVE->V<TYYHK-----------NGS-----------104
KCNH8-------------EKTE-F-------KGE->I<MFYKK-----------NGS-----------105
CNGA1-------------EDDD-SASTSEESENEN>-<PHA-R-----------GSF-----------66
CNGA2-------------AADDDTSSE-------->-<LQR-L-----------ADV-----------56
CNGA3-------------SSEE-TSSVLQPGIAME>-<TRG-L-----------ADS-----------60
CNGA4------------------------------>-<------------------------------
CNGB1-------------AQDT-R-------PGLR>L<LLWLEQNLERVLPQPPKSSEVWRDEPAVAT188
CNGB3------------------------------>-<------------------------------
HCN1EKRLGTPPGGGGAGAKE-H-------GNS->V<CFKVD-------------------------62
HCN2CGRGEPQCSPAGPEGPA-R-------GPK->V<SFSCR-------------------------128
HCN3------------------------------>-<APPPA-------------------------30
HCN4------------------------------>-<-ASCE-------------------------180
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNH2

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.I96Tc.287T>C Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaLQTS Screening for mutations and polymorphisms in the genes KCNH2 and KCNE2 encoding the cardiac HERG/MiRP1 ion channel: implications for acquired and congenital long Q-T syndrome. Clin Chem. 2001 47(8):1390-5. 11468227
Inherited ArrhythmiaLQTS Automated mutation screening using dideoxy fingerprinting and capillary array electrophoresis. Hum Mutat. 2001 18(5):451-7. 11668638
Inherited ArrhythmiaLQTS Classification of the long-QT syndrome based on discriminant analysis of T-wave morphology. Med Biol Eng Comput. 2006 44(7):543-9. 16937190
Inherited ArrhythmiaLQTS Large-scale mutational analysis of Kv11.1 reveals molecular insights into type 2 long QT syndrome. Nat Commun. 2014 5:5535. doi: 10.1038/ncomms6535. 25417810
p.I96Vc.286A>G Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429