Paralogue Annotation for KCNQ1 residue 160

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 160
Reference Amino Acid: E - Glutamate
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNQ1 residue 160

No paralogue variants have been mapped to residue 160 for KCNQ1.



KCNQ1------------------ALATGT-LF-WM>E<IVLVVFFGTEYVVRLWSAGCRSKYVGLWGR190
KCNQ2------------------KSSEGA-LY-IL>E<IVTIVVFGVEYFVRIWAAGCCCRYRGWRGR160
KCNQ3------------------TVSGDW-LL-LL>E<TFAIFIFGAEFALRIWAAGCCCRYKGWRGR190
KCNQ4------------------ELANEC-LL-IL>E<FVMIVVFGLEYIVRVWSAGCCCRYRGWQGR166
KCNQ5------------------KLASSC-LL-IL>E<FVMIVVFGLEFIIRIWSAGCCCRYRGWQGR194
KCNA1---D------NTTVIYNSNIFTDP-FF-IV>E<TLCIIWFSFELVVR---------FFACPSK246
KCNA10---L-----NMSKTVLSQTMFTDP-FF-MV>E<STCIVWFTFELVLR---------FVVCPSK296
KCNA2---S-----NSTIGYQQSTSFTDP-FF-IV>E<TLCIIWFSFEFLVR---------FFACPSK247
KCNA3---N-----STSGSRAGASSFSDP-FF-VV>E<TLCIIWFSFELLVR---------FFACPSK320
KCNA4NDTS-----APHLENSGHTIFNDP-FF-IV>E<TVCIVWFSFEFVVR---------CFACPSQ396
KCNA5APPS-----GPTVAPLLPRTLADP-FF-IV>E<TTCVIWFTFELLVR---------FFACPSK349
KCNA6TPGEMGTGGSSSLSTLGGSFFTDP-FF-LV>E<TLCIVWFTFELLVR---------FSACPSK288
KCNA7-NGS-----SQMPGNPPRLPFNDP-FF-VV>E<TLCICWFSFELLVR---------LLVCPSK234
KCNB1-------------------STDNPQLA-HV>E<AVCIAWFTMEYLLR---------FLSSPKK254
KCNB2-------------------LNDNRQLA-HV>E<AVCIAWFTMEYLLR---------FLSSPNK258
KCNC1---R-----NGTQVRYYREAETEA-FLTYI>E<GVCVVWFTFEFLMR---------VIFCPNK270
KCNC2---I-----NGTSVVLQYEIETDP-ALTYV>E<GVCVVWFTFEFLVR---------IVFSPNK307
KCNC3---G-----APPENITNVEVETEP-FLTYV>E<GVCVVWFTFEFLMR---------ITFCPDK373
KCNC4---G-----NITSVHFRREVETEP-ILTYI>E<GVCVLWFTLEFLVR---------IVCCPDT306
KCND1-------------EQPCGERFPQA-FF-CM>D<TACVLIFTGEYLLR---------LFAAPSR256
KCND2-------------ELPCGERYAVA-FF-CL>D<TACVMIFTVEYLLR---------LAAAPSR254
KCND3-------------ELPCGERYSVA-FF-CL>D<TACVMIFTVEYLLR---------LFAAPSR251
KCNF1-------------------RVEHPTLE-NV>E<TACIGWFTLEYLLR---------LFSSPNK247
KCNG1------------------SQMCHN-VF-IV>E<SVCVGWFSLEFLLR---------LIQAPSK293
KCNG2------------------SPKCRS-LF-VL>E<TVCVAWFSFEFLLR---------SLQAESK243
KCNG3----------DDRSRYSAGPGREP-SG-II>E<AICIGWFTAECIVR---------FIVSKNK246
KCNG4------------------SRKCYY-IF-IV>E<TICVAWFSLEFCLR---------FVQAQDK287
KCNS1---------AVAAGRSPEGVRDDPVLR-RL>E<YFCIAWFSFEVSSR---------LLLAPST297
KCNS2-------------------PGEDPRFE-IV>E<HFGIAWFTFELVAR---------FAVAPDF252
KCNS3--------------------VDDPVLE-GV>E<IACIAWFTGELAVR---------LAAAPCQ247
KCNV1-------------------WLDLQLLE-IL>E<YVCISWFTGEFVLR---------FLCVRDR267
KCNV2------------------GPDLRPILE-HV>E<MLCMGFFTLEYLLR---------LASTPDL327
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.E160Kc.478G>A Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2. Circulation. 2000 102(10):1178-85. 10973849
Inherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Clinical aspects of type-1 long-QT syndrome by location, coding type, and biophysical function of mutations involving the KCNQ1 gene. Circulation. 2007 115(19):2481-9. 17470695
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
p.E160Vc.479A>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: probably damaging
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085