Paralogue Annotation for KCNQ1 residue 2

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 2
Reference Amino Acid: A - Alanine
Protein Domain: N-terminus


Paralogue Variants mapped to KCNQ1 residue 2

No paralogue variants have been mapped to residue 2 for KCNQ1.



KCNQ1M>A<A-----------------------------3
KCNQ2->-<------------------------------
KCNQ3->-<------------------------------
KCNQ4->-<------------------------------
KCNQ5M>-<PRHH-------------------------A6
KCNA1->-<------------------------------
KCNA10M>D<V-C------GWK------------------7
KCNA2->-<------------------------------
KCNA3M>D<E-RL-----SLLRSPPPPSARHRAHPPQRP26
KCNA4M>E<V-AM-----V-------------------S7
KCNA5M>E<I-AL-----V-------------------P7
KCNA6M>R<S-EK-----S-------------------L7
KCNA7M>-<------------------------------1
KCNB1M>-<------------------------------1
KCNB2M>A<E-K---------------------------4
KCNC1->-<------------------------------
KCNC2->-<------------------------------
KCNC3M>L<S-SV-----C-------------------V7
KCNC4M>I<S-SV-----C-------------------V7
KCND1M>A<A-GL-----A-T------------------7
KCND2M>A<A-GV-----A-A------------------7
KCND3M>A<A-GV-----A-A------------------7
KCNF1M>D<G-SG--------------------------5
KCNG1M>T<L-LP--------------------------5
KCNG2->-<------------------------------
KCNG3M>T<F-----------------------------3
KCNG4M>P<M-PS--------------------------5
KCNS1M>L<M-LL--------------------------5
KCNS2M>T<G-QS--------------------------5
KCNS3M>V<F-GE--------------------------5
KCNV1M>P<S-S---------------------------4
KCNV2M>L<K-QSERRRSW-------------------S12
cons > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.A2Vc.5C>T Inherited ArrhythmiaLQTSSIFT: tolerated
Polyphen: benign
ReportsInherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS End-recovery QTc: a useful metric for assessing genetic variants of unknown significance in long-QT syndrome. J Cardiovasc Electrophysiol. 2012 23(6):637-42. doi: 10.1111/j.1540-8167.2011.02265. 22429796