Paralogue Annotation for KCNQ1 residue 225

Residue details

Gene: KCNQ1
Reference Sequences: LRG: LRG_287, Ensembl variant: ENST00000155840 / ENSP00000155840
Amino Acid Position: 225
Reference Amino Acid: S - Serine
Protein Domain: Transmembrane/Linker/Pore


Paralogue Variants mapped to KCNQ1 residue 225

No paralogue variants have been mapped to residue 225 for KCNQ1.



KCNQ1VVLCVG----------------SKGQVFAT>S<AIRGIRFLQILRMLHVDRQGGTWRLLGSVV255
KCNQ2AVLAAG----------------SQGNVFAT>S<ALRSLRFLQILRMIRMDRRGGTWKLLGSVV225
KCNQ3PVVAVG----------------NQGNVLA->T<SLRSLRFLQILRMLRMDRRGGTWKLLGSAI254
KCNQ4AVIAAG----------------TQGNIFAT>S<ALRSMRFLQILRMVRMDRRGGTWKLLGSVV231
KCNQ5AVVSAK----------------TQGNIFAT>S<ALRSLRFLQILRMVRMDRRGGTWKLLGSVV259
KCNA1ITLGTEIAEQEG-------N-QKGEQATSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGQTL319
KCNA10ATLITELVQETEP---------SAQQNMSL>A<ILRIIRLVRVFRIFKLSRHSKGLQILGQTL368
KCNA2ITLGTELAEKPE-------DAQQGQQAMSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGQTL321
KCNA3ITLGTELAERQ----------GNGQQAMSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGQTL391
KCNA4ITLGTDLAQQQGG------GNGQQQQAMSF>A<ILRIIRLVRVFRIFKLSRHSKGLQILGHTL471
KCNA5ITLGTELAEQQ---PGGGGGGQNGQQAMSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGKTL427
KCNA6ITLGTELVQQQEQQPASGGGGQNGQQAMSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGKTL369
KCNA7VALGTELARQR----------GVGQQAMSL>A<ILRVIRLVRVFRIFKLSRHSKGLQILGQTL305
KCNB1VTIFLTES---N--------KSVLQFQNVR>R<VVQIFRIMRILRILKLARHSTGLQSLGFTL324
KCNB2VTIFLTES---N--------KSVLQFQNVR>R<VVQIFRIMRILRILKLARHSTGLQSLGFTL328
KCNC1LEVGLSG-------------LSSKAAKDVL>G<FLRVVRFVRILRIFKLTRHFVGLRVLGHTL338
KCNC2LEVGLSG-------------LSSKAAKDVL>G<FLRVVRFVRILRIFKLTRHFVGLRVLGHTL375
KCNC3LEVGLSG-------------LSSKAAKDVL>G<FLRVVRFVRILRIFKLTRHFVGLRVLGHTL441
KCNC4LEVGLSG-------------LSSKAARDVL>G<FLRVVRFVRILRIFKLTRHFVGLRVLGHTL374
KCND1IGLLVP------------------KNDDVS>G<AFVTLRVFRVFRIFKFSRHSQGLRILGYTL319
KCND2IGLVMT------------------DNEDVS>G<AFVTLRVFRVFRIFKFSRHSQGLRILGYTL317
KCND3IGLVMT------------------NNEDVS>G<AFVTLRVFRVFRIFKFSRHSQGLRILGYTL314
KCNF1VSLTLTHL-----------GARMMELTNVQ>Q<AVQALRIMRIARIFKLARHSSGLQTLTYAL317
KCNG1ITLLVDGAAAGRR----KPGAGNSYLDKVG>L<VLRVLRALRILYVMRLARHSLGLQTLGLTA370
KCNG2VSLLLGL-----A----AGPGGTKLLERAG>L<VLRLLRALRVLYVMRLARHSLGLRSLGLTM315
KCNG3ISVLMTV-----------FTGENSQLQRAG>V<TLRVLRMMRIFWVIKLARHFIGLQTLGLTL316
KCNG4VSLAVSEEPPEDG----ERPSGSSYLEKVG>L<VLRVLRALRILYVMRLARHSLGLQTLGLTV364
KCNS1LTLLAGVALG-D--------QGGKEFGHLG>K<VVQVFRLMRIFRVLKLARHSTGLRSLGATL369
KCNS2ITLVVNLV---V--------ESTPTLANLG>R<VAQVLRLMRIFRILKLARHSTGLRSLGATL322
KCNS3ATLAVDTK---E--------EESEDIENMG>K<VVQILRLMRIFRILKLARHSVGLRSLGATL317
KCNV1ITLLVESLSG-S--------QTTQELENVG>R<IVQVLRLLRALRMLKLGRHSTGLRSLGMTI339
KCNV2LQLLLECFTGEGH----QRGQTVGSVGKVG>Q<VLRVMRLMRIFRILKLARHSTGLRAFGFTL404
cons                              > <                              

See full Alignment of Paralogues


Known Variants in KCNQ1

ProteinCDSDisease ClassificationDiseasedbSNP linksEffect Prediction
p.S225Lc.674C>T Inherited ArrhythmiaLQTSSIFT: deleterious
Polyphen: possibly damaging
ReportsInherited ArrhythmiaLQTS Low penetrance in the long-QT syndrome: clinical impact. Circulation. 1999 99(4):529-33. 9927399
Inherited ArrhythmiaLQTS Spectrum of mutations in long-QT syndrome genes. KVLQT1, HERG, SCN5A, KCNE1, and KCNE2. Circulation. 2000 102(10):1178-85. 10973849
Inherited ArrhythmiaLQTS Location of mutation in the KCNQ1 and phenotypic presentation of long QT syndrome. J Cardiovasc Electrophysiol. 2003 14(11):1149-53. 14678125
Inherited ArrhythmiaLQTS Spectrum and frequency of cardiac channel defects in swimming-triggered arrhythmia syndromes. Circulation. 2004 110(15):2119-24. 15466642
Inherited ArrhythmiaLQTS Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing. Heart Rhythm. 2005 2(5):507-17. 15840476
Inherited ArrhythmiaLQTS Long QT syndrome-associated mutations in the voltage sensor of I(Ks) channels. Cell Physiol Biochem. 2009 24(1-2):11-6. 19590188
Inherited ArrhythmiaLQTS Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test. Heart Rhythm. 2009 6(9):1297-303. 19716085
Inherited ArrhythmiaLQTS Genetic testing for long-QT syndrome: distinguishing pathogenic mutations from benign variants. Circulation. 2009 120(18):1752-60. 19841300
Inherited ArrhythmiaLQTS Structural models for the KCNQ1 voltage-gated potassium channel. Biochemistry. 2007 46(49):14141-52. 17999538
Inherited ArrhythmiaLQTS Clinical aspects of type-1 long-QT syndrome by location, coding type, and biophysical function of mutations involving the KCNQ1 gene. Circulation. 2007 115(19):2481-9. 17470695
Inherited ArrhythmiaLQTS Mutations in cytoplasmic loops of the KCNQ1 channel and the risk of life-threatening events: implications for mutation-specific response to β-blocker therapy in type 1 long-QT syndrome. Circulation. 2012 125(16):1988-96. 22456477
Inherited ArrhythmiaLQTS Phylogenetic and physicochemical analyses enhance the classification of rare nonsynonymous single nucleotide variants in type 1 and 2 long-QT syndrome. Circ Cardiovasc Genet. 2012 5(5):519-28. doi: 10.1161/CIRCGENETICS.112.963785. 22949429
Inherited ArrhythmiaLQTS Mechanisms of I(Ks) suppression in LQT1 mutants. Am J Physiol Heart Circ Physiol. 2000 279(6):H3003-11. 11087258
Inherited ArrhythmiaLQTS RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease. Science. 2015 347(6218):1254806. doi: 10.1126/science.1254806. 25525159